Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02281 ATGCGCCGATTGCAAAAATCCAAAAGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGGTTAGGCTATTCTTATCGGAGGAATCCCCTGCACAAGTTGGGTTAAATTCTCAAGATCACCTCCAAGCTAAGGCACCATCGCTGTTACCTCCAGGTGGACCAGGTTCTGATGACATTCTGCCTCCTGGATTTGAGGGAACTCATTCTTCAAGTCGGTCTGAGATTAAGCCATCTCAAATACCAGTTATTAAGTGGATTACTCCTCCGAAGATTATGCTAAATCTCACATGGCAAGTAGTGTCTGGGGAAGAAAGCAAAGAGGTAGAGGATCAACGTCAGAGGGAGATGAGAGTTCTTGAAGCTATTTATCCTCGCATATCTTCCATTCCTCCAAACCCTTCCGTCTCAGTGGATGTTGAAGATTCAAATTATATGGATGGGCAAGCCGCTTTGATACCAATAACGCCAATTGAAGATGAAGATGCAGCAGCAGAAGCATTATCGGATTCCTTGGAACCATTTGATGTTTCACATTCTCTTGAATTACCTCCTGGTATATTGAAGAATCCAAACTCTGCTACAAGTACGCAACTTGCTCGTGGTCTGACATCTGATGTAGCTGCTGCATCTGTTGCTTTAACTAACATTGTGAAGAGCAATGAACATGGAAAATTGATTGACCATGAATTACTTAATAATATTCTCAGCAATCCAGAAGTGATTGAGAAATTGGTTAGAGATTATGGAGCTACTAATAATTCACAATATGTACATAATGTGGGGTCGTCCGGTGCGACTTTTTCAAATCCTCCTATTCCTGTTAATCAAGGAGAAACGGCTACACCTTCATCGGTTGCTTTTTCAGCCACTTATACACCATCTGCTGGAGGTCAGGTGGCACCTGTTTCTACGCAATGGCCTCCTAGGTCTGCAGCCAGTTCAGCTATTATTTCTTCTCCTGTTGAGGTCCCTGCTGCGAAAGATCTTAACTACTACAAGAGTTTAATTCAACAACATGGAGGAGATAAACAAGAAACACTTCCATACTCCAGTAAACGTCAGATTCATCAGCCAGTAACAAACTATGAGCCAACAACATACAATCAAAGAGCTAAAGTGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACAGTTCTAGAGGATGTCGGAATGGAGCTAACTGTGCATACCAGCATGACGCATCATTTCAGCCACGAGGTAATAGCGTGCCAGGGATACAAAGTTCAAAGAGGATGAAAATGGATCATGAGATTAGCAGTTAA 1290 0.4209 MRRLQKSKRVSWASDLDLCQVRLFLSEESPAQVGLNSQDHLQAKAPSLLPPGGPGSDDILPPGFEGTHSSSRSEIKPSQIPVIKWITPPKIMLNLTWQVVSGEESKEVEDQRQREMRVLEAIYPRISSIPPNPSVSVDVEDSNYMDGQAALIPITPIEDEDAAAEALSDSLEPFDVSHSLELPPGILKNPNSATSTQLARGLTSDVAAASVALTNIVKSNEHGKLIDHELLNNILSNPEVIEKLVRDYGATNNSQYVHNVGSSGATFSNPPIPVNQGETATPSSVAFSATYTPSAGGQVAPVSTQWPPRSAASSAIISSPVEVPAAKDLNYYKSLIQQHGGDKQETLPYSSKRQIHQPVTNYEPTTYNQRAKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNSVPGIQSSKRMKMDHEISS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02281 429 ProSiteProfiles Zinc finger C3H1-type profile. 376 404 IPR000571 GO:0046872
Lapu9g02281 429 MobiDBLite consensus disorder prediction 408 429 - -
Lapu9g02281 429 MobiDBLite consensus disorder prediction 43 75 - -
Lapu9g02281 429 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 271 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02281 Lapu-Chr9 37394564 37400315 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lapu9g02281 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02281 - - gmx:100783321 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02281 9 37394564 37400315 Lapu9g02281 9 37394564 37400315 ECH