Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02280 ATGGGCAAATCTACCTCATGCTTCAAGCTCATCGCTTGCGGTGGCGATGCGGCCACCATGGACGACTACCACCAAGTCTCCGAGATCAAGGAGTCTAATGATAAACGTCGATGGAGTTTCCGTAAAAAATCTGCTAGGCATCGTGTCCTTAGCAATACTGTGATAGCAGAGGCTCCATCTTCAGCAAATAAGGAAAGTTCAGAATGTACTAATTTTAATTTTCAATCACATCCTGAACCTAATGTTGTTGAGAAGATTTACACAACAAATTGCTCTGATGAGAAGCCCCAGTTATCCTCCTTTGAAAACTCACAAGTAGCAGAAACAAATGTAATTGAAACTGAGAGGAAGGTGGATGTGAATCCACCAGAGTCTGATGTCATCATCATCCAGGCAGCTATTAGGAGGTTATTGGCTCAGAGAGAACTGCTACATCGTAAGAAAGTAGTGAAGTTGCAGGCTGTTGTTCGTGGGCACTTGGTCAGGAGGCATGCTCTGGGAACCCTGCGATGTGTTCAAGCCATCATCAAAATGCAGGTTCTTGTGCGAGCTCGTCGTGCTCAACAGGCACATATGGAAAATCATTTAAATCACAAGGATGGCAAAAAGGATTCCTCAGAAGCTTTGGAAAATGAAAACCTGATGGCCAAATCAAATGTGAATTACACTTCCATTGAGAAGCTGCTTAGCAATAGGTTTGCTAGTCAGTTGTTGGAAACAACACCAAAGAACAAACCTATCCATGTCAAGTGTGATCCTTCTAAAGCTGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCCATATCATCAAAAGATGTTGCAGAGTGCAATGAAACTAGTTCTCTAACAGAGCAATCAAAGGAAAGCAAGGATAGCGCTTCTGTGTTTCAATTTGAAACGGGTATCCCATCTGAACCCTTTCCCCCAGCCGCCCCCGACTCAATGCCCACTGTTGAAGATTCACCTCTGCCATCTGAGGATGAAGAAAAGTTGATTACTTATGATGCTAATAACTTTGAGTTCCAAGCAAGCTGCTCCACACCATCTATTGTAAAAGATGACTTACAACAGGTTCCAGCCGAAGAAAAAATTGCATATGATGTTAAAATTACCTCAGCCGATACTGATTCCTTCCAAACTGACAATTTAGCATCCGATGCAAGTGCCCCTCCTGAGCTTTACTCTCTTGACAAGGGACCTGAAATTGCCCCACCATCAGAACATAGTTCTCTTCATCAGGAGCCTGAAATTGCCCCACCACCAGAGCTTAATTCTTTTTATCAGAAGCCTGAAATTGACAGTGAGCAGAACAAACGATCCGGGAAAAGATTTGCATCAGACCAACTAGAGTCTGAAGGAAAGAAAACTGTGAATGGATCAAAGAAGGTCAGTAATCCTTCATTTATTGCTGCACAGTCAAAATTTGAAGAACTGAGTTCAATAGCAAATTCAGGTAGGACAAGCAGTTTGTCCTACCAAGATTCAGCAGTTGAATCACAAGGAGACACCTCTTCTGTTGGCAATGACACTGCATACAAATCAAAAGAGTTTGCATTTGAAAATCCTGCTCTTTATCTTTCAAGGCTTGCTGGTTCTGAATGTGGCACTGAACTCTCCATCTCCTCCACTCTTGATTCACCTGACATATCAGAACCTGGCGTTATGGAAAATGAACGGGATGCCAAAGATTTGGTGGAAGGGGTTGGTAATCTTGAGAACACAATAAACCGTGATGATGAGGCCAATGTTTCATCTGCCATCCCAGCTTCTAACCTAGCTTCTTCTGTTTTGGATCAGTCGGAGGTCGTTGATGACATCAGTGGCAACTTGGGTCATTCCGTGGTGGCTGTGGACTCTGAAGAGCCTGCTATTAGTAATACTGAGAAAAATGCATCTGATCTGCCGAGAGAGCCAGCGGAGGCTGCTCTGCAAGATTTAAGATCATCTCCAGAAGCATCACCCAGAAGCCATTTAACTGTCCCTGAATCACAAGGAACCCCTTCAAGTCAAGTGTCTGTGCAACCTAAAGAGAGCAAAATCAACAAGAGTAGATCTGGCAATAAACGTCGCAGCCTATCCTTAAGTAACCAATCACCTACAACTCCAAATCAAGATTCAGGGTCAAGAGGCAGTATGGAGCAACTGCCTAAAGATCAGCAGAATGGAAAGAGGCGCAGTTCCTTTGGCTCAGTAAAGCCTGATCACGTTGATCAAGAACCTAGAGATAATAGCACCAATAATAATTCTATTCCCCATTTTATGCAAGCTACAGAATCTGCCAGGGCCAAGATTAATGCAAATAACTCTCCAAGATCAAGCCCAGATGTGCATGAACGGGACATCGAAGTTAAGAAGAGACTTTCCTTACCTGGTGCCACTGGTAGGCAAGCTTCTCCACGTATCCAACGATCAACATCTAAGGCACAGCAGACTGCCAAGGGAAACAATGTGCATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA 2487 0.4375 MGKSTSCFKLIACGGDAATMDDYHQVSEIKESNDKRRWSFRKKSARHRVLSNTVIAEAPSSANKESSECTNFNFQSHPEPNVVEKIYTTNCSDEKPQLSSFENSQVAETNVIETERKVDVNPPESDVIIIQAAIRRLLAQRELLHRKKVVKLQAVVRGHLVRRHALGTLRCVQAIIKMQVLVRARRAQQAHMENHLNHKDGKKDSSEALENENLMAKSNVNYTSIEKLLSNRFASQLLETTPKNKPIHVKCDPSKADSAWKWLERWMSISSKDVAECNETSSLTEQSKESKDSASVFQFETGIPSEPFPPAAPDSMPTVEDSPLPSEDEEKLITYDANNFEFQASCSTPSIVKDDLQQVPAEEKIAYDVKITSADTDSFQTDNLASDASAPPELYSLDKGPEIAPPSEHSSLHQEPEIAPPPELNSFYQKPEIDSEQNKRSGKRFASDQLESEGKKTVNGSKKVSNPSFIAAQSKFEELSSIANSGRTSSLSYQDSAVESQGDTSSVGNDTAYKSKEFAFENPALYLSRLAGSECGTELSISSTLDSPDISEPGVMENERDAKDLVEGVGNLENTINRDDEANVSSAIPASNLASSVLDQSEVVDDISGNLGHSVVAVDSEEPAISNTEKNASDLPREPAEAALQDLRSSPEASPRSHLTVPESQGTPSSQVSVQPKESKINKSRSGNKRRSLSLSNQSPTTPNQDSGSRGSMEQLPKDQQNGKRRSSFGSVKPDHVDQEPRDNSTNNNSIPHFMQATESARAKINANNSPRSSPDVHERDIEVKKRLSLPGATGRQASPRIQRSTSKAQQTAKGNNVHPPQERKWLR* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02280 828 MobiDBLite consensus disorder prediction 743 773 - -
Lapu9g02280 828 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Lapu9g02280 828 MobiDBLite consensus disorder prediction 305 325 - -
Lapu9g02280 828 MobiDBLite consensus disorder prediction 688 728 - -
Lapu9g02280 828 MobiDBLite consensus disorder prediction 433 458 - -
Lapu9g02280 828 PANTHER IQ-DOMAIN 5-RELATED 1 797 - -
Lapu9g02280 828 MobiDBLite consensus disorder prediction 482 510 - -
Lapu9g02280 828 MobiDBLite consensus disorder prediction 378 464 - -
Lapu9g02280 828 MobiDBLite consensus disorder prediction 642 828 - -
Lapu9g02280 828 MobiDBLite consensus disorder prediction 650 681 - -
Lapu9g02280 828 MobiDBLite consensus disorder prediction 796 818 - -
Lapu9g02280 828 MobiDBLite consensus disorder prediction 618 637 - -
Lapu9g02280 828 Pfam Protein of unknown function (DUF4005) 717 811 IPR025064 -
Lapu9g02280 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 191 IPR027417 -
Lapu9g02280 828 Pfam IQ calmodulin-binding motif 146 164 IPR000048 GO:0005515
Lapu9g02280 828 Pfam IQ calmodulin-binding motif 127 143 IPR000048 GO:0005515
Lapu9g02280 828 Gene3D - 124 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02280 Lapu-Chr9 37381732 37387943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02280 113 828 IQD Protein Family AT1G19870 35.310 8.38e-104 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02280 - - var:108343123 1462.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02280 9 37381732 37387943 Lapu9g02280 9 37381732 37387943 ECH