Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02278 ATGGATGATGGTGGGCATCGTGAAAATGGTAGGCACAAAGCAGATCAATATAAATCTGCTCAGGGACAGTGGTTGATGCAACATCAGCCTTCCATGAAGCAGATCATGGCAATTATGGCCGAAAGAGATGCAGCCATTCAAGAAAGAAATCTGGCCATTTCTGAGAAGAAGGCAGCATATGCTGAGCGTGACATGGCATTTCTGCAGCGAGACGCTGCAATTGCAGAACGAAATAATGCAATTTTGGAACGAGATAATGCGATTGCTACTCTCCAGTATAGAGAAACCTCGTTAAGTAGTGGCAGTATGCCATCATGCCCTCCGGGATGCCAAATTTCACGTGGTGTCAAGCATATACACCACCCCCAGCAACAGGTACACCACATACCTAACATGGGCGATCCTTCTTACAACGCAAGGGAAATGCACACAACAGATGCCCTCCCTGCAGCTCCCATCACCTCTGAGGCTGGGAAATCAAGGCGGGCCAAGCGGCCCAAGGAACCAAAGTCAACTTCACCTAATAAGAAGACTACAAAAGCAGCAAAAAAAGTAAAAAAGGAGAGTGAAGACTTGAATAAGGTTATGTTTGGCAAGGCACATGAGTGGAAGAATGGTCAGGAAATGGTCAACGGAGGAGGCGATGATCTCAACAAGCAATTAGCAGTGTCTAAGGCTGATTGGAAAGGTCAGGACTTGGGACTGAACCAAGTGGCTTATGATGAGTCAACCATGCCAGCGCCAGTATGTTCTTGTACCGGTGTCCTGAAGCAGTGTTACAAATGGGGTAATGGAGGTTGGCAGTCTGCCTGTTGCACAACCACTTTGTCAATGTATCCTCTTCCTGCAGTGCCGAACAAAAGGCATGCTCGGGTTGGAGGTCGGAAGATGAGTGGTAGCGCTTTCAACAAGCTGCTTAGTCGCCTTGCAGCAGAAGGTCACGATCTGTCAAACCCTGTTGACCTCAAAGACCATTGGGCCAAACATGGGACAAACCGATACATTACAATAAAGTAG 1017 0.4759 MDDGGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLAISEKKAAYAERDMAFLQRDAAIAERNNAILERDNAIATLQYRETSLSSGSMPSCPPGCQISRGVKHIHHPQQQVHHIPNMGDPSYNAREMHTTDALPAAPITSEAGKSRRAKRPKEPKSTSPNKKTTKAAKKVKKESEDLNKVMFGKAHEWKNGQEMVNGGGDDLNKQLAVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLKQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02278 338 MobiDBLite consensus disorder prediction 1 21 - -
Lapu9g02278 338 Coils Coil 58 85 - -
Lapu9g02278 338 PANTHER - 1 338 IPR010409 -
Lapu9g02278 338 MobiDBLite consensus disorder prediction 1 15 - -
Lapu9g02278 338 MobiDBLite consensus disorder prediction 146 188 - -
Lapu9g02278 338 MobiDBLite consensus disorder prediction 158 174 - -
Lapu9g02278 338 SMART GAGA_bind_2 1 338 IPR010409 -
Lapu9g02278 338 Pfam GAGA binding protein-like family 1 338 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02278 Lapu-Chr9 37358832 37363283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02278 65 338 BBR or BPC Transcription factor family AT5G42520 64.948 5.00e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lapu9g02278 GAGA_bind 7.7e-111 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02278 9 37358832 37363283 Lapu9g02278 9 37358832 37363283 ECH