Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02269 ATGAAGATCCAGTGCGACGTTTGTAACAAACACCCGGCTTCTCTATTCTGCACCGCCGATGAAGCCGCCCTCTGCCACGGCTGCGACCACCGTGTCCACCACGCCAACAAGCTCGCCTCCAAACACCAACGCTTCTCCCTCACCCACCCCTCTGCTAAGCATTTTCCTCTCTGTGATGTTTGCCAGGAGAGAAGAGCCTTTGTGTTTTGTCAGCAAGATAGAGCGATTCTGTGCAAAGAGTGTGACGTTTCGATTCATTCCGCCAACGAACTCACCAGGAACCATAGCAGGTTTCTTCTCGCCGGGATCAAGTTCTCTGCTTCTGCCACGCCTTATTCTTCTTCTTCCCCCTCCTCCTCCTCATCATCGTTACCGGAGAAAAACACTGTTCTCGATTCTTCACACCGAATTTCCAATTCGCCTTCAACACCCTCGCCGCCTAAGCCTGGGGGAAACTCGCAAACAAATCATGAGCCTGGTTTCACTGGTAGCAGCATATCAGAGTACTTGATAAACACTATTCCAGGCATGAAGTTCGAAGATTTCCTCGATTCCCATTCCGTTCCCTTTGCTAGCTCCAAGATTAACACGTTGAGGATGAATTGCAGAATGGTGATGAGATGTCGTCGTTGTTTGGTGAGGGAAACATGGTTTCGTTCTCCTCTGGTGGGATCTGGGTGCCTCAAGCGCCACCTTCTTCAGCAGCATATTTGGAACAGATGA 723 0.5035 MKIQCDVCNKHPASLFCTADEAALCHGCDHRVHHANKLASKHQRFSLTHPSAKHFPLCDVCQERRAFVFCQQDRAILCKECDVSIHSANELTRNHSRFLLAGIKFSASATPYSSSSPSSSSSSLPEKNTVLDSSHRISNSPSTPSPPKPGGNSQTNHEPGFTGSSISEYLINTIPGMKFEDFLDSHSVPFASSKINTLRMNCRMVMRCRRCLVRETWFRSPLVGSGCLKRHLLQQHIWNR* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02269 240 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 187 - -
Lapu9g02269 240 CDD Bbox1_BBX-like 5 47 - -
Lapu9g02269 240 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Lapu9g02269 240 MobiDBLite consensus disorder prediction 113 141 - -
Lapu9g02269 240 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lapu9g02269 240 CDD Bbox1_BBX-like 57 100 - -
Lapu9g02269 240 FunFam B-box zinc finger protein 21 1 98 - -
Lapu9g02269 240 MobiDBLite consensus disorder prediction 113 159 - -
Lapu9g02269 240 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Lapu9g02269 240 Pfam B-box zinc finger 56 96 IPR000315 GO:0008270
Lapu9g02269 240 Gene3D Classic Zinc Finger 1 94 - -
Lapu9g02269 240 SMART bboxneu5 53 100 IPR000315 GO:0008270
Lapu9g02269 240 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02269 Lapu-Chr9 37272914 37274274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02269 1 194 C2C2-CO-like Transcription Factor Family AT1G75540 54.762 6.63e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Lapu9g02269 zf-B_box 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02269 - - gmx:100785978 301.212