Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02264 ATGGTGAATGAAGGTGGTTTTCTCCCCACGATGGATCTGCTACGGTCGGAGCCTATGCAATTGGTTCAGTTGATCATTCCAATCGAATCAGCTCATCGATCCATATCTTACCTGGGCGATCTCGGCCTTTTCCAATTCAAAGACCTCAATGTAGATAAAAGTCCATTCCAGCGAACTTATGCTTCTCAGATTAAAAGATGTGGGGAAATGGCGCGTAGGCTACGGTTGTTTAAGGAACAAATGACGAAAGCAGGTGTGTCACCCTCAACGTGGTCAGCAAGAGAGGATAATGTTGATCTGGAAAGTTTGGAGGTTAAACTTGCAGAACTTGAAGCTGACCTCCTTGAGATTAACGCAAATAATGAGAAGTTGAAACACACTTACAATGAGCTATCAGAGTATAAACTCGTTCAAGAGAAGGTTGGTGAATTTTTCTCTTCAGCAAAAAGTAAAGCAGTAGCTCATCAGAAAAAGCTTGAAGTGCAGATAACTGTTGAAAGATCTATTGACAGCCCATTATTATTGGAACAGGAGGAGACGACAGCAAAGCAAATTAAGCTGGGGTTTATCAGTGGACTTGTTTGTAGGGAGAAATCAGTTCCATTCGAAAGAATTCTATTTCGTGCTACTAGGGGAAACGTGTTTCTCAAACAGGCTGTGGTTGAACATTCTGTTCTTGATCTTTTGTCAGGGGAGAAGGTTCATAAAAATGTATTTGTGGTCTTTTATTCTGGAGAAAGAGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCAGATGACTTGGGTAAACAATTTCAGACGATAACAGAGGTTTCAGGAAGACTTGCAGAATTGAAGACTACCATAGATGCAGGATTGCTTCACCGGAGCACTGTATTACAGACAATTGGATATCATTATGAGCAGTGGAGCCTTCAGTTGAAGAAGGAAAAATCCATCTATCACACTCTAAATATGCTTAGCGTTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAACCAGATTCACAAAGTATTGCAGCAGGCAACTGAGGACTGTAGTTCTCAAGTTGGGGCAATATTTCAGGTTTTAGAAACAAAGGAATCACCGCCTACCTATTTTTGCACAAACAAATTCACTTCTTCTTTTCAAGAAATTGTAGATGCCTATGGAGTCGCCAAGTACCAGGAAGCAAATCCTGGTGTGTACACAATTATCACGTTTCCATTCCTTTTTGCTGTAATGTTTGGTGACTGGGGGCATGGCATATGCCTACTACTGGCGGCTTTGTATCTCGTAATCAGAGAGAAAAAAATTTCGAGTCAGAAACTTGGAGACATCATGGAAATGGCTTTCGGTGGACGCTATATTATTACGATGATGGCACTCTTCTCAATCTATACCGGGTTGATATATAATGAGTTCTTCTCTGTTCCATTTGAACTATTTGGACCATCTGCCTATGGATGTCGTGATCCTTCATGCAGGGATGCTTCTACCACAGGTTTAATAAAAGTGCGTGACACCTATCCATTTGGTGTGGATCCTAAATGGCATGGTACTCGGAGTGAACTCCCATTTCTTAATTCTTTGAAGATGAAGATGTCAATTCTGCTGGGGGTATCCCAGATGAATCTTGGAATCATAATGAGTTACTATAATGCAAAATTCTTCGAAAACAACATAAATATATGGTACCAGTTCGTTCCCCAGATGATATTCTTAAATAGCTTGTTTGGCTACCTTTCACTCCTCATAATTGTAAAATGGTGCACTGGGTCACAGGCTGACCTATATCATGTGGTTATATACATGTTCCTAAGCCCAACTGATGATTTAGGTGAAAACCAGCTTTTTGTTGGTCAAAAACTCCTTCAACTTGTCTTATTACTGTTGGCACTTGTTGCTGTACCATGGATGTTAGTACCAAAGCCCTTTCTCCTGAAGAAGCAACATCAAGAAAGGCATCAAGGTCAATCTTATTCTTTGCTATACAACACGGATGATCCTGTCGAATCAGAGTCACATAGTGTTTCCCGTGACCATGATGATTTTGACTTCAGCGAGATTTTTGTGCATCAACTTATACACACAATCGAATTTGTGCTTGGAGCTGTGTCTAATACAGCTTCATATCTACGTTTGTGGGCCCTCAGCTTAGCTCATTCGGAGCTGTCAAGTGTTTTCTATGACAAAGTTCTGCTTCTGGCCTGGGGGTACGACAACACTATTATTCTCATCGTTGGCATTTTTGTTTTTATCTGTGCGACTGTTGGTGTGTTACTGTTAATGGAAACTCTAAGTGCTTTCTTGCATGCTCTGAGACTTCACTGGGTAGAGTTCCAGAACAAATTTTACGAAGGAGATGGTTACAAGTTCTTCCCATTTTCATTTACATTACTCGCGGACGAGGATGAGCTGTAA 2454 0.4059 MVNEGGFLPTMDLLRSEPMQLVQLIIPIESAHRSISYLGDLGLFQFKDLNVDKSPFQRTYASQIKRCGEMARRLRLFKEQMTKAGVSPSTWSAREDNVDLESLEVKLAELEADLLEINANNEKLKHTYNELSEYKLVQEKVGEFFSSAKSKAVAHQKKLEVQITVERSIDSPLLLEQEETTAKQIKLGFISGLVCREKSVPFERILFRATRGNVFLKQAVVEHSVLDLLSGEKVHKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLGKQFQTITEVSGRLAELKTTIDAGLLHRSTVLQTIGYHYEQWSLQLKKEKSIYHTLNMLSVNVTKKCLLAEGWCPVFATNQIHKVLQQATEDCSSQVGAIFQVLETKESPPTYFCTNKFTSSFQEIVDAYGVAKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLAALYLVIREKKISSQKLGDIMEMAFGGRYIITMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDPSCRDASTTGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIIMSYYNAKFFENNINIWYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVVIYMFLSPTDDLGENQLFVGQKLLQLVLLLLALVAVPWMLVPKPFLLKKQHQERHQGQSYSLLYNTDDPVESESHSVSRDHDDFDFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGYDNTIILIVGIFVFICATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFFPFSFTLLADEDEL* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02264 817 Coils Coil 93 127 - -
Lapu9g02264 817 PIRSF ATP6V0A1 9 817 IPR026028 GO:0000220|GO:0046961
Lapu9g02264 817 Pfam V-type ATPase 116kDa subunit family 37 808 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lapu9g02264 817 PANTHER VACUOLAR PROTON ATPASES 13 813 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02264 Lapu-Chr9 37207399 37217442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02264 11 816 Primary Pumps ATPases(2) AT4G39080 74.257 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02264 K02154 - gmx:100805813 1466.44