Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02249 ATGTATCCCAACCAAGCCTTTTCTTCAGGGTCCTATGCGGAGATGATGTCTGGAACTCATCTGTTACCTCATGAATACAGTGAATCTGTAGGAGGACAAAATGAGGTTAAGTTTATCAAAGGTTTGGGTGACACGGTTACCATGCAATCTATTAATGGGCATTCCAATGTTGCAACTTGTGATCCAGTATGCAACTCTTATGCTGGGGATTCCAATGTTGTTCCTAGGACACAAATGGGAATGGTAGATAGTGAGCAAAACATGCAGTGTCAGGGCTTATCTCTCAGTCTCGGAACACTAATGCCTTCTACTGCATCTGTCTCTCCATTTCAATATCAATATCACGACACTGGTCTCTTACCACTAATGACTGATTTTTCAAACCTAAAGGGAACTATGTCTCTCAAAGATGACGAGGCTAATAACCTACGTGAAGATTTTAGAAGTGATGAATGCATGGCGTCTGTGTCCTCTGGAGGCTTTCATGACATTTTAAAAAAGGAGGGTTTTTACAACACCCACCCCTCAATGTGTCTTAAAGAAGTCCCCTCCGATCTCTCGGGTTACTCCAACAGTATTTTAAACTCCCAATACCTTAAGGCGGCACAGGAGTTGCTTGACGAAATCGTCAGTGTTCGAAAGGCTTTGAAGCAACCTGGAATGGAAAAACAAGAGAACGACCGTGACGTTGGATTACATGGCTCTAAAAATTCTGAAGGAAAATCTACCCAAATGTCTTCAGGCCCTAATGGTTCCACTGCCAATGCTTCTAGTGAACTATCATCTGCAGAACGGCAGAACTTGTTAGACAAGAAAACAAAGCTTTTATCCATGCTGGATGAGGTGGATAAAAGATACAGACAGTACTGCCATCAGATGCAGATTGTGGTGTCATCTTTTGACATGGTTGCTGGGATTGGAGCAGCAGAACCATATACAACACTTGCTTTAAGAACAATTTCTCGCCACTTCCGATGTTTGCGTGATGCCATCAGTGGCCAAATTCAAGTGACACAAAGGAGCCTTGGGGAGCAAGAGGGAATACCCCGTCTCCGCTATGTGGATCAGCAACTCAGACAACAAAAGGCCCTTCAGCAACTTGGTGTAATGCGACAAGCTTGGAGGCCTCAGAGGGGGCTTCCTGAAAGCTCTGTTTCAATACTTCGTGCTTGGCTCTTCGAACATTTTCTTCATCCCTATCCCAAGGATTCCGAGAAAATTATGCTGGCTAGGCAAACAGGCTTGACCAGAAACCAGGTGGCAAATTGGTTCATCAATGCAAGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAAGAGTTCGGAGATTTCGAGATGAACTGCAACCTTTCATCTGAGAACACGGTCAAAGGTAAGAGGGATGTTGTTCAGGAGTCTGATAGCAATTTAGTAACCGTTGATAGTGTCCAGGTCCAACCTGAAGCAGAACTGGATAGAGGGGTCAATGCAGAAAATATGGTGATGAATTCTGGAACTGGGAAATTGCAGGGTGACCAGAACCAAAGGCTTGGCATGAATAACATTAACAGCAGCAACAACAGCAACCTTTATTCTATCTCGACCAATCAGAACGGTGGGGATGGGAGCCTAATAGGTTCTACTCATGCAACATATGATTTATCAGAGTTGGGAAACTTTACTGTGGGAGGCCACGTTTCGCTTGCATTGGAGTTGAGAAACTGTGAAAGTGATGGATTTTCCATGTCTGACGATGCTATCCACAAACGACGTAATCAAGCATTGGCCTCTTCCCCGGAGACTGATTTGCTAGATTATCATTTCACGGATTCAGGAAAGCAACAACACAGGTTTGGCAATCCCCATTTGCTGCATGAGTTTGTCGTATGA 1878 0.4425 MYPNQAFSSGSYAEMMSGTHLLPHEYSESVGGQNEVKFIKGLGDTVTMQSINGHSNVATCDPVCNSYAGDSNVVPRTQMGMVDSEQNMQCQGLSLSLGTLMPSTASVSPFQYQYHDTGLLPLMTDFSNLKGTMSLKDDEANNLREDFRSDECMASVSSGGFHDILKKEGFYNTHPSMCLKEVPSDLSGYSNSILNSQYLKAAQELLDEIVSVRKALKQPGMEKQENDRDVGLHGSKNSEGKSTQMSSGPNGSTANASSELSSAERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGIGAAEPYTTLALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDFEMNCNLSSENTVKGKRDVVQESDSNLVTVDSVQVQPEAELDRGVNAENMVMNSGTGKLQGDQNQRLGMNNINSSNNSNLYSISTNQNGGDGSLIGSTHATYDLSELGNFTVGGHVSLALELRNCESDGFSMSDDAIHKRRNQALASSPETDLLDYHFTDSGKQQHRFGNPHLLHEFVV* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02249 625 CDD homeodomain 374 435 IPR001356 GO:0003677
Lapu9g02249 625 ProSiteProfiles 'Homeobox' domain profile. 371 434 IPR001356 GO:0003677
Lapu9g02249 625 SMART prehox3 187 333 IPR006563 -
Lapu9g02249 625 SMART HOX_1 374 438 IPR001356 GO:0003677
Lapu9g02249 625 Pfam Homeobox KN domain 391 430 IPR008422 GO:0003677|GO:0006355
Lapu9g02249 625 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 127 463 - -
Lapu9g02249 625 Pfam Associated with HOX 193 332 IPR006563 -
Lapu9g02249 625 MobiDBLite consensus disorder prediction 217 264 - -
Lapu9g02249 625 Gene3D - 371 447 - -
Lapu9g02249 625 SUPERFAMILY Homeodomain-like 375 441 IPR009057 -
Lapu9g02249 625 MobiDBLite consensus disorder prediction 236 264 - -
Lapu9g02249 625 MobiDBLite consensus disorder prediction 218 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02249 Lapu-Chr9 37076477 37081518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02249 91 446 Homeobox Transcription Factor Family AT1G19700 52.957 1.61e-116 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lapu9g02249 POX 3.8e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02249 - - gmx:100791641 1071.23