Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02224 ATGGGTTGGACACGAGAAGAGAATAGACGTTTTGAGGATGCTCTTGCCATTCATGGCCCTGACGACCCAAATCGGTGGCAACATGTAGCCAACGCCGTGGGTGGAAAATCCGTAGAACAGGTGAAAATGCACTATGAGATCCTCAAGGAAGATGTCATTCGAATAGAGCGTGATCAAATCCCACTACCCAGGTACAGAGGCGCTAGCATCAACGCAAGACAAATTGACAATGAGCAAAGGTAA 243 0.4774 MGWTREENRRFEDALAIHGPDDPNRWQHVANAVGGKSVEQVKMHYEILKEDVIRIERDQIPLPRYRGASINARQIDNEQR* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02224 80 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 74 IPR044636 GO:0003700
Lapu9g02224 80 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Lapu9g02224 80 Gene3D - 2 51 - -
Lapu9g02224 80 SMART sant 3 51 IPR001005 -
Lapu9g02224 80 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Lapu9g02224 80 FunFam Transcription factor SRM1 1 62 - -
Lapu9g02224 80 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Lapu9g02224 80 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Lapu9g02224 80 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Lapu9g02224 80 CDD SANT 3 49 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02224 Lapu-Chr9 36919912 36920174 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu9g02224 Myb_DNA-binding 7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02224 - - gmx:100789698 149.828