Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02220 ATGGCCTCAAGCCAGGGTTGGACACCGAAGCAGAACAAAAGATTTGAGAATGCCCTTGCCATCTTCGACAAGGACACCCCAGATAGGTGGCACAACCTGGCCAGGGCCGTAGGAGGAAAAACGGTGGAAGATGTGAAAAGGCATTATCAGAAGCTCGTGGAAGATGTGAAGCAGATTGAGGAAGGCCATGTGCCCCTTCCCAATTACCGAAGTGTTGCAGCTATGGGAAGCAGCATCAGAGGTTACGGTTACATGGACGAAGAAAACAGGATGAAGGCTCTGAGTCTGCAGTGA 294 0.5102 MASSQGWTPKQNKRFENALAIFDKDTPDRWHNLARAVGGKTVEDVKRHYQKLVEDVKQIEEGHVPLPNYRSVAAMGSSIRGYGYMDEENRMKALSLQ* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02220 97 Pfam Myb-like DNA-binding domain 6 52 IPR001005 -
Lapu9g02220 97 Gene3D - 1 66 - -
Lapu9g02220 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 76 IPR044636 GO:0003700
Lapu9g02220 97 CDD SANT 7 53 IPR001005 -
Lapu9g02220 97 FunFam Transcription factor SRM1 1 66 - -
Lapu9g02220 97 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Lapu9g02220 97 SMART sant 3 55 IPR001005 -
Lapu9g02220 97 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02220 Lapu-Chr9 36903144 36903673 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu9g02220 Myb_DNA-binding 5.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02220 - - vra:106761704 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02220 9 36903144 36903673 Lapu9g02220 9 36903144 36903673 ECH