Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02188 ATGGATCTCACGATTCAGTACCTGGTCGCAGCAGTTATTATCATACTCTTAATTTCTTTCCTCATCAAAAGGGCCACACCAGGTTCCGCCCGCAAGCCACCGGAAGCAGCCGGTGGGTGGCCTTTGTTCGGTCATCTTCACCTCTTAGGTGGTTCCACTGAGCCTCCTTACATAACCTTAGGATCCTTAGCAGACAAGTATGGCCCAATATTCAGCATCCGAATTGGTCTGCATCCAGCTGTGGTGGTAAGCTCTTGGGAGTTAGCCAAAGAGTGTTTCACCACTGTAGACGTCGTTATCTCTTCTCGTCCCAAATTCACAGCCGCTAAAATCCTGGGCTACAACTATGCTAACTTTGGGTTTTCCCCTTACGGAGAATTCTGGCGTGAGATGCGCAAGATTACGGCTTCAGAGTTGCTCTCCTCTACCCGCTTCGAACTTCTTAAAGATATTAGACACTCCGAGGTCCGCAGCTCCTTCAAAGAATTGTACAGTATATGGGCGGACAAAAGAGGTGGCTCCAATTACTTGTTGGTCGAGATGAAACAGTGGTTCGGAGACGTCAATCTCAACGTCATTCTGCGGATGATTTCGGGAAAGCAATACTCCGCCAAAAGTGAAGACGAGCAACAGGTGAGGCGGATTCGCAGGGTTTTCAGAGAGTTCTTCCGTTTGACTGGGTTGTTTGTGGTTGGAGACGCGATTCCCTTTCTGGGGTGGCTTGATTGGGGAGGTGAAGTAAAGGAGATGAAAAAAACGGCTGTGGAAATGGATATCATCGTTTCTGAGTGGTTAGAAGAACATCGCCAGAAAAGAGATGCAGATGATGAGAGCAAAACAGAACAGGACTTCGTTGATGTTTTGTTGTCAGTCCTTAAAGGCGTCGACCTTGCCGGCTATGATGTTGACACTGTCATAAAAGCCACCTGCACGATGTTGATTGCTGGAGCAACTGATACCACAGCAGTTACCATGACATGGGCACTCTCGTTGTTGCTGAATAATCGGCACGCGTTGAAGAAAGTGCAAGATGAATTGGATGAACATGTGGGAAAAGGAAGATTAGTGAATGAATCGGATATTAACAAATTAGTTTACCTTCAAGCTGTGGTTAAAGAGACACTGCGACTGTACCCAGCTGGGCCCTTCTCGGGTCCACGTGAATTCACAGAAAATTGTACATTAGGTGGCTTCAATATCCAAGCGGGTACCCGATTTATGTTGAACATTTGGAAATTACATAGAGATCCACGAATATGGTCAAATCCATTGGAGTTTCAACCAGAGAGGTTCTTGAACGCCCACAGAAGTGTTGATCTGAAGGGTCAGCATTTCGAACTCCTTCCCTTTGGTGGTGGAAGAAGGTTGTGCCCTGGCATATCATTTGGTCTTCAAATGACGCACCTGGTCCTGGCTTCACTTTTGCAGGCATTTGAAATCACAACTCCGTCCAATGCTCAAGTTGATATGAGTGCCACTTTTGGACTCACAAACATGAAAACCACTCCTCTTGAGGTTTTAGTCAGACCCGCTTTATCACATCATCTACTAGTCGATGATGTTTAG 1566 0.4642 MDLTIQYLVAAVIIILLISFLIKRATPGSARKPPEAAGGWPLFGHLHLLGGSTEPPYITLGSLADKYGPIFSIRIGLHPAVVVSSWELAKECFTTVDVVISSRPKFTAAKILGYNYANFGFSPYGEFWREMRKITASELLSSTRFELLKDIRHSEVRSSFKELYSIWADKRGGSNYLLVEMKQWFGDVNLNVILRMISGKQYSAKSEDEQQVRRIRRVFREFFRLTGLFVVGDAIPFLGWLDWGGEVKEMKKTAVEMDIIVSEWLEEHRQKRDADDESKTEQDFVDVLLSVLKGVDLAGYDVDTVIKATCTMLIAGATDTTAVTMTWALSLLLNNRHALKKVQDELDEHVGKGRLVNESDINKLVYLQAVVKETLRLYPAGPFSGPREFTENCTLGGFNIQAGTRFMLNIWKLHRDPRIWSNPLEFQPERFLNAHRSVDLKGQHFELLPFGGGRRLCPGISFGLQMTHLVLASLLQAFEITTPSNAQVDMSATFGLTNMKTTPLEVLVRPALSHHLLVDDV* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02188 521 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 SUPERFAMILY Cytochrome P450 39 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 Pfam Cytochrome P450 38 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu9g02188 521 FunFam Cytochrome P450 82C4 23 509 - -
Lapu9g02188 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Lapu9g02188 521 PANTHER CYTOCHROME P450 82C3-RELATED 11 515 - -
Lapu9g02188 521 CDD CYP82 68 510 - -
Lapu9g02188 521 Gene3D Cytochrome P450 23 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02188 Lapu-Chr9 36604828 36606868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02188 1 518 Cytochrome P450 AT4G31940 47.719 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02188 - - gmx:100810391 882.093