Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02183 ATGGCCTCGAGCTGCTTTCTATTGTTTTCTCTATTCCTCCTCTCATCATTATCATCTTCCTCCTATGCAATTTCCGACGTTGAAGCCTCTCTCATTGCTCGTCGCCAATTGTTGCACTTGCATGAGAATGAGGACTTGCCCGACAACTACGTCAGTAACTATAAAACAACCCTAAAATTCTCTAACACCAGACTTAAAGGTGCATACATTGCACTGGAGGCGTGGAAAAAAGCTTTCTACTCGGACCCCACAAATTTCACATCAAATTGGTCGGGCCCAGATGTTTGCTCCTACAATGGAGTTTTTTGTGCAAAGGCTTTAGATGACCCAAAGATCGAAGTTGTAGCTGGGATTGATCTTAACCATGCAGACATCGCAGGTTACATTCCCCCAGAATTTGGTCTGTTAGTTGACCTTGCTCTTTTGCATATAAACTCCAACAGGTTTTGTGGGATTATCCCGCACAGCTTTTCCAACCTTAAGATTCTGTTTGAGCTAGACGTCAGCAACAACCGCTTTGTTGGGGAGTTCCCTGAGCCCGTGCTTAACATTCCAGAACTCAAATTCCTTGACCTCAGGTTCAATAACTTCGAAGGGGAACTGCCTTCTGAGCTTTTCAACAAAAGCTTCGACGCTATATTTTTGAACAATAACCGCTTCAGCTCCTATATTCCTGAGAACCTCGGATCAACTCCTGCCACGGTTGTGGTTATAGCCAATAACAATCTCACGGGGTGCGTGCCTTCTAGCGTTGGCGACATGAAGTCATTGAACGAGTTTATTTTGGCGAACAACAACCTCACCGGTTGCTTGCCAGCAGAAATTGGAAAACTAGAAAAAGTTACAGTGTTTGATGTAAGCGGCAACAACTTCGTTGGCGTGTTGCCGAGGACCTTAAATGGGCTTAAGAGTCTTGAGATCATCTCCATTGCACAAAACAAGTTAACAGGTTTTGTCCCGCGTAATGTTTGCAGCTTGTCCCATTTGGTGAACTTCACATTCTCCAATAACTATTTCAACGGAGAGGAAGAAGGTTGCGTACCTCAGAAGAAAGACGTTGCATTGGATGATGAGAACAACTGCATACCAGATAGGCCAAAGCAAAAGCAGTCAAGCGCTTGCAATGAGGTGATAAGCAAGCCTGTGGATTGTAGCAAAGACAAGTGTGGGCATGGAAGCTCCTCTCCATCTCCCAGTTCTCCAACAACGCCATCTAAGCAAACACCAAACCCAAGAAACCAAACATTCCACTCCTCCATCACCCAAATCAGCACCACCACCACCCGATGA 1290 0.4519 MASSCFLLFSLFLLSSLSSSSYAISDVEASLIARRQLLHLHENEDLPDNYVSNYKTTLKFSNTRLKGAYIALEAWKKAFYSDPTNFTSNWSGPDVCSYNGVFCAKALDDPKIEVVAGIDLNHADIAGYIPPEFGLLVDLALLHINSNRFCGIIPHSFSNLKILFELDVSNNRFVGEFPEPVLNIPELKFLDLRFNNFEGELPSELFNKSFDAIFLNNNRFSSYIPENLGSTPATVVVIANNNLTGCVPSSVGDMKSLNEFILANNNLTGCLPAEIGKLEKVTVFDVSGNNFVGVLPRTLNGLKSLEIISIAQNKLTGFVPRNVCSLSHLVNFTFSNNYFNGEEEGCVPQKKDVALDDENNCIPDRPKQKQSSACNEVISKPVDCSKDKCGHGSSSPSPSSPTTPSKQTPNPRNQTFHSSITQISTTTTR* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02183 429 MobiDBLite consensus disorder prediction 390 429 - -
Lapu9g02183 429 Pfam Leucine rich repeat N-terminal domain 71 103 IPR013210 -
Lapu9g02183 429 Gene3D Ribonuclease Inhibitor 233 369 IPR032675 -
Lapu9g02183 429 Pfam Leucine rich repeat 139 197 IPR001611 GO:0005515
Lapu9g02183 429 SUPERFAMILY L domain-like 76 360 - -
Lapu9g02183 429 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 414 - -
Lapu9g02183 429 MobiDBLite consensus disorder prediction 385 429 - -
Lapu9g02183 429 FunFam Leucine-rich repeat extensin-like protein 1 69 227 - -
Lapu9g02183 429 FunFam Leucine-rich repeat receptor protein kinase EMS1 228 321 - -
Lapu9g02183 429 Gene3D Ribonuclease Inhibitor 68 232 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02183 Lapu-Chr9 36551912 36554300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02183 5 390 Trihelix Transcription Factor Family AT3G19020 59.948 6.70e-168 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02183 - - gmx:100780677 637.106