Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02179 ATGACCACCGCCAACTCTAACAAGCCTTCTTCTCCTCCACCTACCATCCAACAACGTAGGCTCACTCGACAGGGGAGACTCCGATACCTCAGTGACAAAGACGCTGGTCTGCATTCCACCACTTCTCTACCCTCTTCTCCTCTTCCCTCCTTCAAGTCCGCTTCCGCTTCCGACCATTGGTCTTCCTCTGCGGTTCCCCAACCGCTTCCGCGTCCCGACTCCCCGTTGACCCGCCGATACGACCATCATCACCTCGGATCTCCCCCTTTCGAACATCCTGCCTTCGCTTTTCCCAGAAGGTCGGTGGATCATGATGCGGTGAGAAGTATAAGGTCTGCCAGCAATTTGGGTAGACCTTCTTTTGATCCGGTGGCTCCAAATGCCAAATACGATTTGAGAGTGAACATTCCATCTGCTAGAGTGTTGGCAGGCAATACTAGTTCATGTAAAGATCACGTGGAACACTCTCATGATAATGACTCTGAAAATGTTTCCAACTTGAGATTGCATTTTTCGGCCAAGAGTGCCCCCAACAGCATATTCTCCAGCCCTGTTACTAGTCCACGTAGATCCAGCAACGTAGATTTCTATGATCCTTCCATCATTTTTCCTCAAGATTTTAATGACATTTTGAGAGTGTCACCGGCTAAAACTGCTCAGAGTCCAGACCAGGCTCCTCTCCGCAGCCCAGGGAGCCTCCTCAATCCAGAGGGATGTCAGAGTCAGCTCCATAAACCTAGCTCAAGAGTGTTGCCTGAAAATAATCATGTTGATGCACATCCACTGCCCCTTCCTCCTAGAGCGTCACCATTGCCAGCACAGTCATCTCCGCAGCATCAACCAAGTACCGTGCACCTCACCACAGAAAATTTACCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATAGGGCGAGGATCATATGGGTCTGTTTACCACGCAACCAACTTAGAGACCGGAGCCTCGTGTGCAATGAAAGAGGTGGAAATGTTCCCCGATGATCCTAAATCTGCTGACTGCATAAAGCAACTTGAACAGGAAATCAGAATACTCCGTCAATTGCACCACCCAAACATTGTGCAGTATTATGGAAGCGAATTGGATGGCGATCGACTGTACATATATATGGAGTATGTTCATCCTGGATCACTTGATAAGTTTATGCGCGATCATTGTGGAGCTATGACAGAATCTGTCGTTCGCAACTTCACAAGACATATTCTCTCTGGATTGGCATACTTGCATAGTACCAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGCTGGTGGATGCATCAGGCATGGTTAAACTTGCGGATTTCGGGGTGTCAAAAATTCTGACAGAGAAATCATACGAACTTTCATTGAAGGGTAGTCCCTACTGGATGGCTCCCGAGCTCATGAAGGCTGCCATAAAGAAAGAATCCGGCCCTGACGTTGCCATGGCCATTGATATATGGAGCTTAGGGTGCACTATCATCGAAATGCTGACAGGAAAACCTCCTTGGAGGGAATATGAAGGGCCGCAAGCCATGTTCAAGGTACTGCATAAATCCCCTGATATACCTGAAAATTTGTCGTCAGACGGAAAGGATTTCCTTCAGCAGTGCTTCAGAAGGAATCCGGCCGATCGACCATCGGCAGCACTGCTTCTTACACATGCTTTTCTACAAAATTTGCATGATCAAGATGTTCTACTTCATTCACAAGTGCAAAGCTGTCCCAGAGGAGACCCTGGATCTGGAGATGATTCAAGTAGACATAGCCCCAGTCAGAGTTCAAGAAATAATAACCGTGGTGTAGTACCAGCCTCCATTGGCGCACGGTTTTTGCACAAAATTCATAATTTAATAGGTGACACTTCGAAGAAATATGACAGCGAGGAATCTAACCATGTCACTTCTTCTCGTAACTCTCCCTGCTCGATGACAGAAATAAATAGTCCTCAATCCCCCTTGAAATCTAATGCCCTCAATTACATGGCCAATTCCAGCAACATACCCCTCACCACCGTTATGAGAATCATCAGGCACATTTGA 2046 0.4702 MTTANSNKPSSPPPTIQQRRLTRQGRLRYLSDKDAGLHSTTSLPSSPLPSFKSASASDHWSSSAVPQPLPRPDSPLTRRYDHHHLGSPPFEHPAFAFPRRSVDHDAVRSIRSASNLGRPSFDPVAPNAKYDLRVNIPSARVLAGNTSSCKDHVEHSHDNDSENVSNLRLHFSAKSAPNSIFSSPVTSPRRSSNVDFYDPSIIFPQDFNDILRVSPAKTAQSPDQAPLRSPGSLLNPEGCQSQLHKPSSRVLPENNHVDAHPLPLPPRASPLPAQSSPQHQPSTVHLTTENLPSMKGQWQKGKLIGRGSYGSVYHATNLETGASCAMKEVEMFPDDPKSADCIKQLEQEIRILRQLHHPNIVQYYGSELDGDRLYIYMEYVHPGSLDKFMRDHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGMVKLADFGVSKILTEKSYELSLKGSPYWMAPELMKAAIKKESGPDVAMAIDIWSLGCTIIEMLTGKPPWREYEGPQAMFKVLHKSPDIPENLSSDGKDFLQQCFRRNPADRPSAALLLTHAFLQNLHDQDVLLHSQVQSCPRGDPGSGDDSSRHSPSQSSRNNNRGVVPASIGARFLHKIHNLIGDTSKKYDSEESNHVTSSRNSPCSMTEINSPQSPLKSNALNYMANSSNIPLTTVMRIIRHI* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02179 681 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 52 587 - -
Lapu9g02179 681 MobiDBLite consensus disorder prediction 1 93 - -
Lapu9g02179 681 MobiDBLite consensus disorder prediction 573 603 - -
Lapu9g02179 681 ProSiteProfiles Protein kinase domain profile. 298 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02179 681 ProSitePatterns Protein kinases ATP-binding region signature. 304 327 IPR017441 GO:0005524
Lapu9g02179 681 MobiDBLite consensus disorder prediction 586 603 - -
Lapu9g02179 681 MobiDBLite consensus disorder prediction 634 652 - -
Lapu9g02179 681 Pfam Protein kinase domain 299 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02179 681 Gene3D Transferase(Phosphotransferase) domain 1 295 591 - -
Lapu9g02179 681 SUPERFAMILY Protein kinase-like (PK-like) 273 574 IPR011009 -
Lapu9g02179 681 MobiDBLite consensus disorder prediction 624 652 - -
Lapu9g02179 681 FunFam Mitogen-activated protein kinase kinase kinase 5 295 598 - -
Lapu9g02179 681 MobiDBLite consensus disorder prediction 273 291 - -
Lapu9g02179 681 MobiDBLite consensus disorder prediction 35 64 - -
Lapu9g02179 681 MobiDBLite consensus disorder prediction 216 291 - -
Lapu9g02179 681 MobiDBLite consensus disorder prediction 1 24 - -
Lapu9g02179 681 SMART serkin_6 298 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02179 681 MobiDBLite consensus disorder prediction 216 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02179 Lapu-Chr9 36518309 36524430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02179 20 561 MAP Kinase Kinase Kinase AT5G66850 45.714 1.75e-150 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu9g02179 Pkinase 3.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02179 - - gmx:100781764 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02179 9 36518309 36524430 Lapu9g02179 9 36518309 36524430 ECH