Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02163 ATGGTGACAGCATCAGCATACGAGGAGAGTCGTCGCAAGCGGTTAGAGGAAAACAAAAAGAGAATGGAAGCTCTCAATCTCCCTCTCCTCTCTAAAGCCCTTCACAAATCCCTTTCTCCCAAATCCTCCCCGATGAAATCGGCCAAGAATCGCATCATTCATAAAGAGGTGGTTGTGGTTAGAAGATCAAGCCGTGTTGCCAACTTGCCCTCTCCTGTTTATAAAGAAGTGGTTATTGATCGGGTCACTATACCTAGAAGAAGTATTGGTAGAGCTTACAATAGGCACCGAGATTATGCCAATAGGGTATACGCTTCGGATGAAGCCAGAGAGGAAGCATTGGAGAAAGCAGAAAAGTTAATGTCGGGTTTAGAATCTGATTATCCAGCCTTCATAAAGTCTATGCTCCAGTCCCACATTAGTGGGGGGTTCTGGCTGGGCCTTCCAGTCCATTTCTGCAAGAGCAATCTTCCAAAAGGGGATGAAGTGATGACTTTGATTGATGAAGATGGGAATGAGTATCCGACAATATATTTGCCACGTAAAACAGGACTTAGTGGGGGATGGAAAGGTTTTGCTGTTGCTCATGACCTAGCTGACGGGGACGCTTTAATTTTCCAATTAGTCAAGCGCACTGCATTCAAGGTGTACATTATTAGAGCGAATAGTCCTTCACAGGATAAACAACTCAAGTGA 696 0.4468 MVTASAYEESRRKRLEENKKRMEALNLPLLSKALHKSLSPKSSPMKSAKNRIIHKEVVVVRRSSRVANLPSPVYKEVVIDRVTIPRRSIGRAYNRHRDYANRVYASDEAREEALEKAEKLMSGLESDYPAFIKSMLQSHISGGFWLGLPVHFCKSNLPKGDEVMTLIDEDGNEYPTIYLPRKTGLSGGWKGFAVAHDLADGDALIFQLVKRTAFKVYIIRANSPSQDKQLK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02163 231 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 50 224 IPR044837 -
Lapu9g02163 231 SMART B3_2 131 222 IPR003340 GO:0003677
Lapu9g02163 231 CDD B3_DNA 129 220 IPR003340 GO:0003677
Lapu9g02163 231 Gene3D - 105 223 IPR015300 -
Lapu9g02163 231 Pfam B3 DNA binding domain 131 221 IPR003340 GO:0003677
Lapu9g02163 231 ProSiteProfiles B3 DNA-binding domain profile. 131 222 IPR003340 GO:0003677
Lapu9g02163 231 SUPERFAMILY DNA-binding pseudobarrel domain 125 222 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02163 Lapu-Chr9 36377205 36381006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02163 55 226 B3 DNA Binding Superfamily AT5G42700 59.302 6.35e-68 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lapu9g02163 B3 1.3e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02163 - - gmx:100797091 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02163 9 36377205 36381006 Lapu9g02163 9 36377205 36381006 ECH