Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02154 ATGGTGGCAGTAGCAATAGGAAGAGGCCTCCCCATTCAACCCCGCTTTTTATTCAATAGTCAGAGCTTAGATAAAACTTCACCAGCAGGAAGGTTGTCGTGGCTTGGGCATGCTGCTGCTGTCACTCCACGTTATAGACAAACTTGCGTAGCAGCGCAACAGCGACCTACATGGCTCCCAGGACTTGATCCCCCACCTTATCTTGATGGAACTCTGGCTGGAGATTTTGGATTCGACCCACTTGGGCTTGGAGAGGATCCTGAAAACTTAAGGTGGTATGTGCAGGCAGAGCTGGTTCATTCCCGCTTTGCAATGCTTGGGGTATTGGGAATTCTAGTGACAGATCTGCTTCGCGTCACAGGAGTTAGCAAGATACCTGTTTGGTTTGAAGCTGGTGCAGTAAAATACGACCTTGCCAATACACAGACACTCTTCATTGTTCAACTACTTTTGATGGGGTTTGCCGAAACAAAAAGGTACATGGATTTTGTTAGTCCTGGATCTCAAGCTAAAGAGGGGTCCTTCTTCGGACTGGAAGCTTCACTGGAAGGCTTAGAGCCAGGGTACCCAGGGGGTCCTCTGCTAAATCCTCTTGGCCTAGCTAAAGACATTAAAAACGCTCATGATTCGAAGCTTAAAGAGATTAAAAATGGTCGACTTGCAATGGTGGCAATGGTTGGCATCTTTGTACAAGCTTCGGTGACTCACGTTGGACCGATTGATAACCTTGTGGAGCATCTTTCCAATCCATGGCATAAAACTATTATTCAGACCATTGCGAATTCTAGGTCTTAG 795 0.4679 MVAVAIGRGLPIQPRFLFNSQSLDKTSPAGRLSWLGHAAAVTPRYRQTCVAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPENLRWYVQAELVHSRFAMLGVLGILVTDLLRVTGVSKIPVWFEAGAVKYDLANTQTLFIVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGLEASLEGLEPGYPGGPLLNPLGLAKDIKNAHDSKLKEIKNGRLAMVAMVGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTIANSRS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02154 264 Pfam Chlorophyll A-B binding protein 64 232 IPR022796 -
Lapu9g02154 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 47 261 IPR001344 GO:0009765|GO:0016020
Lapu9g02154 264 SUPERFAMILY Chlorophyll a-b binding protein 50 261 - -
Lapu9g02154 264 Gene3D Chlorophyll a/b binding protein domain 55 264 - -
Lapu9g02154 264 FunFam Chlorophyll a-b binding protein, chloroplastic 56 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02154 Lapu-Chr9 36307848 36313355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02154 47 256 Chloroplast and Mitochondria Gene Families AT3G61470 45.972 9.04e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02154 K08911 - gmx:100804934 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02154 9 36307848 36313355 Lapu9g02154 9 36307848 36313355 ECH