Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02146 ATGGACACTATGGAGCAGTTAAAGCCGGAGGAGGAGGAGCAGCAGCAGATGGACATCATGACCATGATGATGCAACACCTCCCTCAATTCTCTGAACCCTATGGGGACACTAACTCCATGGAAGGGTTTCAACCCCCAGAGGAGTTCTACGCTAACAACAACAATATACGCAGTGGTAGCACTATGCCACTGGCAGATTTACTTGATAATAACCCTCCTAGCCCCATACCTTGGTCCTCTTACTCATTCACACACTTATTACCATCATCCACATCCACCACTACAATCTCTTTCTCCAACAACAACAACCCTACCCCAATAATGCTTCAACAAACCCCAACCGAGGGTGCAACTGTAAACCCTTATGGTGAGAAGCGGAGCTCCATGGCGGCGATGAGAGAGATGATATTCAGGATGGCGGCGATGCAGCCGATACACATAGACCCGGAGTCGGTGAAGCCGCCGAAGCGGAGGAACGTGAAGATTTCAAAGGACCCTCAGAGTGTGGCGGCGCGCCACCGCAGAGAGAGGATCAGCGAGAGGATAAGGATACTGCAGAGACTGGTCCCTGGAGGGACCAAGATGGACACGGCGTCCATGTTGGATGAGGCCATTCACTACGTCAAGTTTCTCAAAACGCAGGTTCAGTCACTGGAACGCGCTTCCGCTAACAATATTAGACCAGTTGTTGGTGCTAACGCACCGGGGATAGGGTTCCCTGTTGCTATGTCTGGTACTATTAGGACTGCTACCACTTCCAGTTCCAATTCCACCCCTTATTTCCCTCTGCCTAATAGATATGATTAA 807 0.5043 MDTMEQLKPEEEEQQQMDIMTMMMQHLPQFSEPYGDTNSMEGFQPPEEFYANNNNIRSGSTMPLADLLDNNPPSPIPWSSYSFTHLLPSSTSTTTISFSNNNNPTPIMLQQTPTEGATVNPYGEKRSSMAAMREMIFRMAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERASANNIRPVVGANAPGIGFPVAMSGTIRTATTSSSNSTPYFPLPNRYD* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02146 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 220 IPR036638 GO:0046983
Lapu9g02146 268 FunFam BHLH transcription factor 165 228 - -
Lapu9g02146 268 Pfam Helix-loop-helix DNA-binding domain 172 211 IPR011598 GO:0046983
Lapu9g02146 268 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 22 256 IPR045843 GO:0003700|GO:0006355
Lapu9g02146 268 Gene3D - 161 228 IPR036638 GO:0046983
Lapu9g02146 268 SMART finulus 168 217 IPR011598 GO:0046983
Lapu9g02146 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Lapu9g02146 268 MobiDBLite consensus disorder prediction 249 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02146 Lapu-Chr9 36247538 36248344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02146 127 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 87.879 2.23e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu9g02146 HLH 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02146 - - vum:124831293 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02146 9 36247538 36248344 Lapu9g02146 9 36247538 36248344 ECH