Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02143 ATGAGGATGGCAAGTAATCCCGTAGTTCAACAGGTTTCAGAATGCTTCATCAAAGCAAATCACTCCTTCCAAGAATCAAGCCAAAGCTGCCACTTAACACCATGGGATATTGCCATGTTGTCTGCCCATTATATCCAGAAGGGTCTTCTCTACAAGAAGCCACCACTTGTTAATCAACATGATTTCATTGAGAATCTGTTGGAGAAGCTCAAACACTCTCTTTGTCTCACCCTCACCCATTTCTATCCGTTGGTTGGTCACCTTGTCACCCGCAAAACACAACACCCTCCCTTCTATTCTGTTTTCGTTGATTGCACAAAAAATTCTGGAGCTAGATTCATCCATGCAACTTTAGATATGACCATGTCTGATATCCTCTCTCCCGTTGATGTCCCACCCATTGTTCAATCATTGTTTGATCTCGATAGAGCACTCAACCATGATGGTCACACCATGCCGCTGTTGTCCATCCAAGTCACTGAACTTGTAGATGGTGTTTTCATAGGTTGTTCCATGAACCACTCTATTGGTGATGGCACTTCTTATTGGAATTTCTTCAACACGTGGTCTGAGATCTTTCAAGCTCAAGCTGAAGGCCATGAACATGATGTTCCCATATCGCACCGTCCCATTCACAATCGCTGGTTTCCGAATAATTGCGTTCCACCAATCAATCTTCCTTTTAAACACCACGACGAGTTTCTCGACAGGTATGAAGCACCCTTGATGAGAGAGAGAATCTTCCATTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCTAAAGCCAACTCGGAATGCAACACCACAAAAATCTCTTCGTTCCAGTCACTGTCAGCACTTGTTTGGAGATGCATAACTCGGGCGCGACGCTTGGCGCGTGATCAGAGAACAAGTTGCAAGTTATCCACAAACAACCGGACAAGAATGGAACCGCCTTTGGCCCAGGAGTACTTCGGAAACTCGATTCATACCCTAAGTGCAGGAACAGCCATGTCAGGTGAATTGCTTGACAATGGTCTGGGATGGGCAGCATGGAAGTTGCACCTGGCTGTTGTAAACCATAACGACAGAGTGGTGTTGGCATGGGTGAGAGAGTGGTTAGAGTCTCCTCTGATATATCAACTTGGTCGTTACTTTGACCCCTACTGTGTTATGATGGGAAGCTCGCCCAGATTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGCAGTGGCAGTTAGAAGTGGATATGCCAACAAATTTGATGGAAAAGTTACGTCATATCCAGGCCATGAAGGTGGAGGAAGCGTAGATTTAGAAGTATGTCTTTCGCCAGGTGTGATGACTGCGCTAGAATCAGACCAGGAGTTCATGGACTCAGTTTCAGCCTCCGATCCTCTCTAG 1386 0.4531 MRMASNPVVQQVSECFIKANHSFQESSQSCHLTPWDIAMLSAHYIQKGLLYKKPPLVNQHDFIENLLEKLKHSLCLTLTHFYPLVGHLVTRKTQHPPFYSVFVDCTKNSGARFIHATLDMTMSDILSPVDVPPIVQSLFDLDRALNHDGHTMPLLSIQVTELVDGVFIGCSMNHSIGDGTSYWNFFNTWSEIFQAQAEGHEHDVPISHRPIHNRWFPNNCVPPINLPFKHHDEFLDRYEAPLMRERIFHFSAESIAKLKAKANSECNTTKISSFQSLSALVWRCITRARRLARDQRTSCKLSTNNRTRMEPPLAQEYFGNSIHTLSAGTAMSGELLDNGLGWAAWKLHLAVVNHNDRVVLAWVREWLESPLIYQLGRYFDPYCVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGHEGGGSVDLEVCLSPGVMTALESDQEFMDSVSASDPL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02143 461 Gene3D - 4 233 IPR023213 -
Lapu9g02143 461 Gene3D - 234 448 IPR023213 -
Lapu9g02143 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 11 452 - -
Lapu9g02143 461 Pfam Transferase family 16 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02143 Lapu-Chr9 36164615 36166371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02143 68 446 Monolignol Biosynthesis Gene Families AT5G48930 27.820 1.94e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02143 - - gmx:100787228 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02143 9 36164615 36166371 Lapu9g02143 9 36164615 36166371 ECH