Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02142 ATGATACCTTTCACACAACACAACACATCCCCCGATTCAGTTCAGACATCTCTTAGCTATCTGCAACACAGCTCTGAAATTTTGGTGAGAATTTGGATGATGAATTCCCCTGTAGCAAGAACAGTTTCCGAATGTTTTATCAAGCCGTTGGGAGCTCAAGAGTCAAACGGAATATGCAATTTAACACCTTGGGATATTTCTATGCTGTCCATGCACTACATCCAGAAGGGTCTACTCTTCAAGAAACATGCAATACTTGTTGATCAACAACATTTCTCAGAGAATCTGATGGAGAAGCTCAAGCACTCTCTTTCTCTCGCCCTCTTCCATTTCTATCCGTTGTCTGGTCGCCTTGTTACCCACAAAACAGAAGACCCATCATCTTATACTATTTTCGTCGATTGCAACAACAGTGATGGAGCTAGATTCATCTATGCAACTTTGAATTTGACAATATCTGACATACTCTCACCTGTTCACGTCCCACCCATTGTTCACTCATTCTTTGACCACCACAAAGCTGTCAACCATGACGGTCACACCATGCCACTCTTGTCCATTAAAGTCACTGAACTATTGGATGGTTTTTTCATAGGCTGTTCTATGAACCATGCCATAGGCGATGGAACTTCGTATTGGAATTTCTTTAATACATGGTCTGAGATCTTTCAAGCTCAAGCGCAAGCTCAAGGCCATGAATACGATGTTCCCATTTCACGCCACCCTATTCATAAACGGTGGTTTCCTGATGGTTGTGCCCCATTAATCAATCTTCCCTTCAAACATCACGACGAGTTTATTAGCAGATTTGAAGCACCCAAGCTGAGAGAGAGAATCTTCCATTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAGGGCTAACTCAGAGTCCAAGACCACCAAAATCTCTTCGTTCCAATCCTTATCAGGTCATGTATGGAGATGCATAACACGCGCACGTCAGCTGGCAGATGATGAGATAACAAGTTGCAAATTGGCCATAAATAATCGAGAAAGAATGGAGCCGCCGCTGCCACATGAATACTTTGGAAACTCTATTGGTGTGGTGAGTGCGGGGACAACAGTAGGGGAATTGCTGGAGAATGATCTAGGATGGGCGGCATGGAAGGTGTGCCTGGCTGTTGCAAACCGAAACGACAGAGCAGTGCGACTCGGGGTCAAAGAGTGGTTAGAACGCCCTCTGGTGTACCAACTTGGTGTGCACTTTGATCCGTGTAGTGTGACGATGTCAAGTTCGCCCAGGTTCGACATGTATGGGAATGAATTTGGGATGGGAAAAGCAGTGGCAGTTCTGAGTGGATATGCCAACAAATTTGACGGGAATGTGACTTCATATCCAGGATCCGAAGGAGGGGGAAGCATAGATTTGGAAGTCTCCCTTTCGCCTAATGCAATGAGTTTACTAGAATCAGATGAGGAGTTTATGGAAGCTGTTTCTGTGGTCAATTCCCTACACTAG 1482 0.4453 MIPFTQHNTSPDSVQTSLSYLQHSSEILVRIWMMNSPVARTVSECFIKPLGAQESNGICNLTPWDISMLSMHYIQKGLLFKKHAILVDQQHFSENLMEKLKHSLSLALFHFYPLSGRLVTHKTEDPSSYTIFVDCNNSDGARFIYATLNLTISDILSPVHVPPIVHSFFDHHKAVNHDGHTMPLLSIKVTELLDGFFIGCSMNHAIGDGTSYWNFFNTWSEIFQAQAQAQGHEYDVPISRHPIHKRWFPDGCAPLINLPFKHHDEFISRFEAPKLRERIFHFSAESIAKLKARANSESKTTKISSFQSLSGHVWRCITRARQLADDEITSCKLAINNRERMEPPLPHEYFGNSIGVVSAGTTVGELLENDLGWAAWKVCLAVANRNDRAVRLGVKEWLERPLVYQLGVHFDPCSVTMSSSPRFDMYGNEFGMGKAVAVLSGYANKFDGNVTSYPGSEGGGSIDLEVSLSPNAMSLLESDEEFMEAVSVVNSLH* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02142 493 FunFam Tryptamine hydroxycinnamoyl transferase 262 479 - -
Lapu9g02142 493 Gene3D - 264 478 IPR023213 -
Lapu9g02142 493 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 42 484 - -
Lapu9g02142 493 Gene3D - 39 256 IPR023213 -
Lapu9g02142 493 Pfam Transferase family 47 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02142 Lapu-Chr9 36149162 36151892 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02142 98 477 Monolignol Biosynthesis Gene Families AT5G48930 28.030 1.98e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02142 - - vum:124831304 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02142 9 36149162 36151892 Lapu9g02142 9 36149162 36151892 ECH