Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02139 ATGAGTAGCCCTGCCCTTCGACGCATTTCAGAGTGTTTCGTGAAGCCTCACCCCTCCAACCAAGTCTCCAATTTAACACCTTGGGATATTGCCATGTTGTCTGTGCACTATATCCAGAAGGGTCTACTCTTCAAGAAGCCTGCAGCCCTTGTTGATCAACAATATTTCGTGGAGAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCCCTCACTCTCTCCCATTTCTATCCATTGTCTGGTCGCCTTGTCACCCACAAAACCCAACACCCCCCCTCTTATACTGTTTCTGTTGATTGCAACAACAGTGATGGAGCCAGATTCATTCATGCTGCTGTGGATATCACCATATCTGACATACTCTCCCCAGTTGACACCCCATCCATTTTTCACTCATTCTTTGACCACCACAAAGCAGTCAACCATGACGGTCACACCATGTCGCTGTTGTCCATCCAAGTCACTGAATTGGTCGATGGTGTTTTCATAGGTTGTTCCATGAATCATGTTATTGGCGATGGAACTTCGTATTGGAATTTCTTCAATACATGGTCTCAGATCTTTCAAGCACAATCTCAAGCTGAAAGTCATGATTACGATGTTCCCATCTCACGCCACCCCATTCACAATCGTTGGTTTCCAAATAATTGTACTCCACCAATCTCTCTTCCTTTCCAACATCACCACGAGTTTATAGAGAGATCTGAAGCACCCTTGCTGAGACAGAGAACTTTCCACTTTTCAGCAGAGTCTATTGGCGAACTAAAAGCAAAGGCCAACTCAGAATCCAATACCACAAAAATATCTTCCTTCCAGTCACTATCAGCACTTGTTTGGAGATCGATAACTCGTGCACGCTCCCTGCCGTCTGACCAAAAAACAAGTTGCAGATTAGCCGCAAACAGTCGATCAAGAATGGAACCGCCTCTGCCTGAAGAATACTTTGGAAACTGCCTTCATGCAGTGAGTGCAGAAACGACAGCAGGGGAATTGCTTGAGAATGGTGTAGGATGGGCAGCGTGGAAGTTGCACCAGGCTGTCACAAACCTTAGCGATAGAGTGGTGTTGCAATATCTTCAAAACTGGTTAGATTCTCCTATCATATATCAAATGGGTCGTTTCTTTGACCCGTATTGTGTGATGATGGGTAGCTCCCCCAGGTTCAATATGTATGGGAGTGAATTTGGAATGGGGAAAGCGGTGGCTGCTAGAAGTGGCTATGCAAACAAATTTGATGGGAAAGTGTCATCATATCCAGGGCGTGAAGGAGGGGGAAGCATTGATTTAGAAGTTTGCCTTTTTCCACATGTAATGAGTGCTTTGGAATCTGATAAGGAGTTCATGAATGCAGTTTCTGTGTTGAATCCCCTGTTATTCTAG 1377 0.4503 MSSPALRRISECFVKPHPSNQVSNLTPWDIAMLSVHYIQKGLLFKKPAALVDQQYFVENLLEKLKHSLSLTLSHFYPLSGRLVTHKTQHPPSYTVSVDCNNSDGARFIHAAVDITISDILSPVDTPSIFHSFFDHHKAVNHDGHTMSLLSIQVTELVDGVFIGCSMNHVIGDGTSYWNFFNTWSQIFQAQSQAESHDYDVPISRHPIHNRWFPNNCTPPISLPFQHHHEFIERSEAPLLRQRTFHFSAESIGELKAKANSESNTTKISSFQSLSALVWRSITRARSLPSDQKTSCRLAANSRSRMEPPLPEEYFGNCLHAVSAETTAGELLENGVGWAAWKLHQAVTNLSDRVVLQYLQNWLDSPIIYQMGRFFDPYCVMMGSSPRFNMYGSEFGMGKAVAARSGYANKFDGKVSSYPGREGGGSIDLEVCLFPHVMSALESDKEFMNAVSVLNPLLF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02139 458 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 448 - -
Lapu9g02139 458 Gene3D - 225 442 IPR023213 -
Lapu9g02139 458 Pfam Transferase family 21 447 - -
Lapu9g02139 458 Gene3D - 8 220 IPR023213 -
Lapu9g02139 458 FunFam Tryptamine hydroxycinnamoyl transferase 225 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02139 Lapu-Chr9 36125693 36127101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02139 12 441 Monolignol Biosynthesis Gene Families AT5G48930 26.535 2.36e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02139 - - vra:106761257 784.252