Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02138 ATGAGTACCCCTGCTGTTAGACGCATTTCAGAATGCTTCGTGAAGCCTCACCCCTCCAACCAAGTCTCCAACCAAGTCTGCAATTTAACTCCTTGGGATATCTCCATGTTGTCTACGCACTATATCCAGAAGGGTTTGCTCTTCAACAAGCCTGCAACTCTTGTGGATCAACAATATTTCACTGAGAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCATTGTCTGGTCGCCTTGTCACCCACAAAACCCAACACCCCCCCTCTTATACTGTTTTTGTTGATTGCAACAACAGTGATGGAGCCAGATTCATTCATGCAGCTCTGGATATCACCATATCTGACTTACTCTCCCCAGTTGACACCCCATCCATTTTTCACTCATTCTTTGACCACCACAAAGCGGTCAACCATGACGGTCACACCATGTCGCTGTTGTCCATCCAAGTCACTGAATTGGTCGATGGTGTTTTCATAGGTTGTTCCATGAATCATGTTATTGGCGATGGAACTTCTTATTGGAATTTCTTCAATACATGGTCTCAGATCTTTCAAGCACAATCTCAAGCTGGAAGTCATGATTACGATGTTACCATCTCACGCCACCCCATTCACAATCGTTGGTTTCCAAATAATTGTACTCCACCAATCTCTCTTCCTTTCCAACATCATGACGAGTTCATAGAGAGATCTGAAACACCTTTGCTGAGAGAGAGAATTTTCCACTTTTCAGCAGAGTCTATTGCCAAACTGAAAGCAAAGGCCAACTCAGAATCCAATACCACAGGAATCTCTTCGTTCCAGTCATTATCGGCTCTTGTTTGGAGATCGATAACTCGTGCGCGGTCCCCACCGTCTGAGCAAAAAACAAGTTGCAGATTAGCCGCAAACAATAGATCAAGAATGAAACCGCCTCTGCCCGAAGAATACTTTGGAAACTGCCTTCATGCAGTGAGTGTAGAAACGACAGCAGGGGAATTGCTTGAGAATGGTCTAGGATGGGCAGCATGGAAGTTGCACGTGGCTGTTGCAAACCTTAACGATAGAGTGGTGTTAGAATTTCTGAAAGGGTGGATAGATTCTCCTTTCATAATTCAAATGGGTCGTTTCTTTGACCCGTATAGCGTGTTGATGGGTAGTTCCCCCAGGTTCAATATGTATGGGAGTGAATTTGGAATGGGGAAAGCAGTGGCTGCTATAAGTGGCTATGCGAACAAATTTGATGGGAAAGTGTCATCATACCCAGGGCGTGAAGGAGGGGGAAGCATTGATTTGGAAGTTTGCCTTTTGCCACATATACTGAGTGCTTTGGAATCAGATAAGGAGTTTATGAATGCAGTTTCTGTGTTCAATCCCCTGTTCTTCTAG 1389 0.4464 MSTPAVRRISECFVKPHPSNQVSNQVCNLTPWDISMLSTHYIQKGLLFNKPATLVDQQYFTENLLEKLKHSLSLTLSHFYPLSGRLVTHKTQHPPSYTVFVDCNNSDGARFIHAALDITISDLLSPVDTPSIFHSFFDHHKAVNHDGHTMSLLSIQVTELVDGVFIGCSMNHVIGDGTSYWNFFNTWSQIFQAQSQAGSHDYDVTISRHPIHNRWFPNNCTPPISLPFQHHDEFIERSETPLLRERIFHFSAESIAKLKAKANSESNTTGISSFQSLSALVWRSITRARSPPSEQKTSCRLAANNRSRMKPPLPEEYFGNCLHAVSVETTAGELLENGLGWAAWKLHVAVANLNDRVVLEFLKGWIDSPFIIQMGRFFDPYSVLMGSSPRFNMYGSEFGMGKAVAAISGYANKFDGKVSSYPGREGGGSIDLEVCLLPHILSALESDKEFMNAVSVFNPLFF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02138 462 Gene3D - 8 223 IPR023213 -
Lapu9g02138 462 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 452 - -
Lapu9g02138 462 Gene3D - 229 446 IPR023213 -
Lapu9g02138 462 Pfam Transferase family 18 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02138 Lapu-Chr9 36120676 36122072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02138 66 436 Monolignol Biosynthesis Gene Families AT5G48930 27.708 3.51e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02138 - - vra:106761257 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02138 9 36120676 36122072 Lapu9g02138 9 36120676 36122072 ECH