Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02135 ATGACCACCACCATGAAGGTGCATCACTTCACACGTGCATTCTGGGAGCATGAACCTTTCCTCACCCTTGGCTGCAAGCGATTACGCCCTCTTGCTCCCAAGCTTCCAAACGCCGACACCACCACCACCACCCCTTCTCTTCATTTCGATCTCAAGAGCTTCATCAGACCAGAAAGTGGACCCAGAAAACTAGTTTCCTCTCTCCAAAATAACAATGATCCACCTTCACCCCAAGCCCAGGTTGAAACGCATCCAGGAGGGACGCGGTGGAATCCGACGCAAGAACAGATAGGTATATTGGAGATGCTGTACAAAGGAGGGACGAGGACTCCCAATGCTCAACAGATAGAGCAGATCACGGTTCAGCTAGGAAAGTACGGAAAGATCGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAACAGCCTTGCCTTTTCTCATACTCCTCGAACTCCCACAATTCATACTGTTGTTACTTTAGAGACAACAAGGGGGGAAGTAGTAGATAGAGATGACGAGGAAGGTAGTCCGTACAAAAAGAAGTGTAGGAGATGGGTATTTGATTGTTTGGAAGAGCAAAGCCTGTCATCATCATCACTGTGTGAAGAGGAGGAGCATAGAACTCTAGAGCTTTTCCCATTGCACCCAGAAGGAAGATGA 693 0.4791 MTTTMKVHHFTRAFWEHEPFLTLGCKRLRPLAPKLPNADTTTTTPSLHFDLKSFIRPESGPRKLVSSLQNNNDPPSPQAQVETHPGGTRWNPTQEQIGILEMLYKGGTRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLAFSHTPRTPTIHTVVTLETTRGEVVDRDDEEGSPYKKKCRRWVFDCLEEQSLSSSSLCEEEEHRTLELFPLHPEGR* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02135 230 FunFam WUSCHEL-related homeobox 4 87 154 - -
Lapu9g02135 230 Gene3D - 88 153 - -
Lapu9g02135 230 MobiDBLite consensus disorder prediction 61 92 - -
Lapu9g02135 230 ProSiteProfiles 'Homeobox' domain profile. 83 148 IPR001356 GO:0003677
Lapu9g02135 230 SUPERFAMILY Homeodomain-like 84 155 IPR009057 -
Lapu9g02135 230 Pfam Homeodomain 88 147 IPR001356 GO:0003677
Lapu9g02135 230 SMART HOX_1 85 152 IPR001356 GO:0003677
Lapu9g02135 230 MobiDBLite consensus disorder prediction 63 92 - -
Lapu9g02135 230 CDD homeodomain 88 149 IPR001356 GO:0003677
Lapu9g02135 230 PANTHER WUSCHEL-RELATED HOMEOBOX 4 5 230 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02135 Lapu-Chr9 36100033 36101420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02135 5 154 Wox Gene Family AT1G46480 64.815 8.79e-64 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu9g02135 Homeodomain 7.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02135 - - gmx:100781015 394.43