Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02131 ATGCCGAACGCAACCCACCTCCTTCACCCCCACCCCTTCCTGTTACTGTTCCTGCTTCTGCTCCCACACGCTTCTTCATACGCACATTCCTTCCAACTCCAACACCGTCATATTCCACCGTTAGTTTTCACGGACGCCAACGCCCTCCTCGCATTCAAACTTAAGGCCGACATTCACAACCACCTTGACTTCTCCCCCACCACGCGCGGCCTCCGCTTCTGCGCGTGGCAGGGCGTCCACTGCAACGGTCCCAAAGTAGAGCGTCTCCTTCTCCAAGGCTTAGATCTCGGCGGCGTTTGGGCTCCCAACACACTCACCCGTCTCGACCAGCTCCGAGTCCTCAGTTTACAGAACAACTCACTCACCGGAACCATACCGGACCTCTCCGGTCTCTTCAATCTCAAAAGCCTCTTCCTCGACAATAACCATTTCACCGGTTCTCTCCCTCCCTCACTCTTCTCTCTCCACCGTCTACGAAACTTGGATTTCTCTCACAACAATCTCTCTGGACCTATCTCCGCTGCGTTCACTAACCTAGATCGTCTTCACAGCCTCCGTCTTAGTTATAACGCTTTCACCGGTTCAATCCCTCCGTTTAACCAGTCATCTCTCAGAATATTTGAAATATCCGGCAACAACCTCTCCGGCGCCATTCCAGTGACGCCGATTCTCTTTCGTTTTCCGGCCTCTTCCTTCGCGTTCAACCCTGACCTGTGCGGTGAAATCATCCGCGTGCAATGCCGTCCCGCGCAGCCTTTCTTCGGGCCCGCGGCGCCGCCTACGGCGCCGCTCGGTCAAAGCGCGCAGGTGCATGGCGTCAGTGCCGCGGCAGTGATGCGGATGGAGATGGAGAGAGAGTTGGAGGAGAAGGTGAAGAGAGCGGAGGTGGCGAAGAGTGGGAGTTTGGTATTCTGTGCGGGTGAGGCGCAGGTTTATACGCTGGACCAGTTGATGAAGGGTTCCGCGGAGCTTTTAGGTAGAGGGTGTTTGGGAACCACTTACAAGGCGGCTCTTGATAACCGTCTGACGGTGACGGTGAAGCGCCTTGATGCGGGGAAAATGGCTGCCCATGCAACGAAGGAAGTGTTCGAGCGACACATGGAATCCGTTGGTGGGCTTCGACACCCCAATTTGGTTCCTCTTAGGGCCTATTTCCAGGCCAAGCAAGAGAGGCTCATCATCTATGACTTCCAGCCCAATGACAGTCTCTTCTCCCTCATTCACGGATCGAGATCAAGCAGGGCAAGGCCATTGCACTGGACATCATGCTTAAAAATAGCAGAGGACGTAGCACAAGGTCTGGCCTTCATCCACCAGGCATGGAGACTGGTTCACGGTAATCTCAAGTCCTCCAATGTCCTTCTTGGACCTGATTTCGAGGCATGCATCACAGATTACTGCCTATCCGTGTTGACTCACCCATCGACATTTGATGAAGATGGGGATTCAGCAGCATACAGAGCTCCAGAGACTCGCAACCCGAATCACCAGCCAACCCACAAATCCGATGTTTTTGCCTATGGGATTTTGTTGCTTGAGCTTCTGACGGGTAAATTTCCCGCAGAGCTTCCATTCATGGTTCCTGGTGACATGTCAAGTTGGGTGAGGTCCATCAGGGATGACAATGGGGGCGAAGATAGCCGAATGGACATGCTTCTTCAGGTTGCTACAACTTGTAGCTTGACCTCACCGGAGCAGAGGCCAACTATGTGGCAGGTCTTGAAAATGTTGCAGGAAATAAAAGAGATTGTACTATTGGAGGATAGTAGTGAATTGGAACTGCGCAGTGTGGATAGAAGGACAAAAGATTAG 1812 0.5315 MPNATHLLHPHPFLLLFLLLLPHASSYAHSFQLQHRHIPPLVFTDANALLAFKLKADIHNHLDFSPTTRGLRFCAWQGVHCNGPKVERLLLQGLDLGGVWAPNTLTRLDQLRVLSLQNNSLTGTIPDLSGLFNLKSLFLDNNHFTGSLPPSLFSLHRLRNLDFSHNNLSGPISAAFTNLDRLHSLRLSYNAFTGSIPPFNQSSLRIFEISGNNLSGAIPVTPILFRFPASSFAFNPDLCGEIIRVQCRPAQPFFGPAAPPTAPLGQSAQVHGVSAAAVMRMEMERELEEKVKRAEVAKSGSLVFCAGEAQVYTLDQLMKGSAELLGRGCLGTTYKAALDNRLTVTVKRLDAGKMAAHATKEVFERHMESVGGLRHPNLVPLRAYFQAKQERLIIYDFQPNDSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLAFIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSVLTHPSTFDEDGDSAAYRAPETRNPNHQPTHKSDVFAYGILLLELLTGKFPAELPFMVPGDMSSWVRSIRDDNGGEDSRMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDSSELELRSVDRRTKD* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02131 603 Gene3D Ribonuclease Inhibitor 155 240 IPR032675 -
Lapu9g02131 603 Gene3D Transferase(Phosphotransferase) domain 1 399 594 - -
Lapu9g02131 603 ProSiteProfiles Leucine-rich repeat profile. 110 132 IPR001611 GO:0005515
Lapu9g02131 603 SUPERFAMILY Protein kinase-like (PK-like) 323 578 IPR011009 -
Lapu9g02131 603 Pfam Leucine rich repeat 133 191 IPR001611 GO:0005515
Lapu9g02131 603 Gene3D Ribonuclease Inhibitor 44 154 IPR032675 -
Lapu9g02131 603 FunFam Nuclear pore complex protein NUP107 42 198 - -
Lapu9g02131 603 SUPERFAMILY L domain-like 44 220 - -
Lapu9g02131 603 Gene3D Phosphorylase Kinase; domain 1 280 397 - -
Lapu9g02131 603 Pfam Protein kinase domain 323 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02131 603 ProSiteProfiles Protein kinase domain profile. 319 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02131 603 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 581 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02131 Lapu-Chr9 36033410 36037568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02131 13 588 Receptor kinase-like Gene Family AT5G43020 48.554 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu9g02131 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02131 - - var:108341030 791.186