Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02127 ATGGCTAATCACCACCACCACCACCATCATGCACATGACACCAACCTCAAATCCCTTCTGGACACCCTATACTGCTCCGAAGAGCACTGGGAGGAACACGTTGGGGAAGATGAATTAGACCAACCAGAGGATGATTACCTTGGCGCTAATAACACTACTAATAATAACACTACCGGTACCAGCACCATAATAAACTCCCTTCACTCCCCTCGTGTCTTGTTCGAAAGCGACATGTTTTGTGACCAACAAGAGTTGACATCGCTGCTGGGGAAAGAGCAACACAACCCTCTAAGCACTTGCCTCCAAACCAACCCTGCCTTGGAGTGTGCTCGCAGAGAAGGCGTGGAGTGGATGCTCAGAGTGAATGCCCACCACTCCTTCTCTGCTCTCACAGCTCTTCTTGCCGTCAACTACTTTGACCGCTTCCTCTCCAGCTTCCGCTTTCAGGATGGCAAGCCATGGATGACACATCTCGCTGCCGTCGCTTGCCTCTCCCTCGCTGCCAAAGTGGAGGAGACACAAGTTCCCCTTCTCCTAGACCTTCAAATGGAGGAGAGTAGATACTTGTTCGAAGCCAAAACGATTAAAAGGATGGAGATTTTGGTCCTTTCCACTCTTGGATGGAAGATGAACCCGCCAACCCCTCTCTCCTTTCTTGATTACATGACAAGAAGACTTGGATTGAAGGATCATCTGTGCAGGGAGTTCCTGAGGAAGTGCGAAGGCGTTCTCGTCTCTGTTCTTGGAGATTGGAGGTTTATGAGTTATCTACCGTCTGAATTGGCAAGTGCTACGATGATACACGTTGTGAAAAGCGTGGAGCCTTGTGTAGAAGGTGAATACCAGAGGCAACTCCTGGGTATTCTGGGATTCGACAAGGAGAAGGTGAATGAATGTGGGAAGGTGTTGGAGTCGTGGTCAGGGTACGAGAAGCAGGGGAAGCAATGCAGGAAGCGGAAGTTTGGAAGCGTTCCAGGAAGTCCAAACGGTGTGATGGAGATGTCGTTTAGCTGTGATAGCTCGAATGAGTCGTGGGCTGTAGTTGGTGCTGTTGCTTCAGTGTGTTCTTCACCGGAAGCTTTGTCGAAGAAGAGTAGAAGTGAAGTAAAGCGATAA 1116 0.4955 MANHHHHHHHAHDTNLKSLLDTLYCSEEHWEEHVGEDELDQPEDDYLGANNTTNNNTTGTSTIINSLHSPRVLFESDMFCDQQELTSLLGKEQHNPLSTCLQTNPALECARREGVEWMLRVNAHHSFSALTALLAVNYFDRFLSSFRFQDGKPWMTHLAAVACLSLAAKVEETQVPLLLDLQMEESRYLFEAKTIKRMEILVLSTLGWKMNPPTPLSFLDYMTRRLGLKDHLCREFLRKCEGVLVSVLGDWRFMSYLPSELASATMIHVVKSVEPCVEGEYQRQLLGILGFDKEKVNECGKVLESWSGYEKQGKQCRKRKFGSVPGSPNGVMEMSFSCDSSNESWAVVGAVASVCSSPEALSKKSRSEVKR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02127 371 CDD CYCLIN_AtCycD-like_rpt2 214 303 - -
Lapu9g02127 371 Gene3D - 98 211 - -
Lapu9g02127 371 FunFam D3-type cyclin 104 211 - -
Lapu9g02127 371 SUPERFAMILY Cyclin-like 196 309 IPR036915 -
Lapu9g02127 371 FunFam CYCLIN D32 212 301 - -
Lapu9g02127 371 Pfam Cyclin, C-terminal domain 213 322 IPR004367 -
Lapu9g02127 371 CDD CYCLIN_AtCycD-like_rpt1 110 208 - -
Lapu9g02127 371 MobiDBLite consensus disorder prediction 46 62 - -
Lapu9g02127 371 PANTHER CYCLINS 88 311 IPR039361 -
Lapu9g02127 371 SMART Cyclin_C_2 213 340 IPR004367 -
Lapu9g02127 371 MobiDBLite consensus disorder prediction 34 62 - -
Lapu9g02127 371 SMART cyclin_7 116 204 IPR013763 -
Lapu9g02127 371 SUPERFAMILY Cyclin-like 89 211 IPR036915 -
Lapu9g02127 371 Pfam Cyclin, N-terminal domain 98 211 IPR006671 -
Lapu9g02127 371 Gene3D - 212 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02127 Lapu-Chr9 35992030 35994893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02127 77 368 Core Cell Cycle Gene Families AT5G67260 50.505 3.31e-87 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02127 K14505 - gmx:100795892 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02127 9 35992030 35994893 Lapu2g00534 2 4585090 4587104 ECH
Lapu9g02127 9 35992030 35994893 Lapu3g01510 3 17781147 17783246 ECH
Lapu9g02127 9 35992030 35994893 Lapu7g02329 7 39518237 39520719 ECH
Lapu9g02127 9 35992030 35994893 Lapu9g02127 9 35992030 35994893 ECH