Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02123 ATGCAGCTTCTGCTCTCTAGAGCAATGCATATCAACCTCTTTCTTCTTCTCCTCTTTATCTCTACTTCATCTGCAGCTACAGACACACTTTCAGAAGGTTCCTCACTTTCAGTCGAGAAACAAGTTGACACCCTCCTTTCATCCAATGGAGATTTTTCTGCTAGCTTCTTCCAAGTTGGTGAAAACGCCTTCTGCTTCTCCGTTTGCTTCACGCGCTCTGAACGACCCACCGTTGTATGGATGGCCAACCGTGATGAACCCGTCAACGGCAAAGGCTCCTTCCTTTCACTCTGGAAAAACGGCAACCTAGTTTTGACGGATGCCGGAGAAACCGTTATCTGGTCAACCGCCACTTTCTCCTCCTCCCAACTTCATCTAAAGCTAAGAAACAACGGAAACCTCGTTCTCCTCACTTCCGAAGGAATCATCATTTGGCAAAGCTTCGATTTCCCGACGGACACCCTTCTTCCAACTCAACCACTCAAGGAGAGAGTTGCCCTCGTTTCTTCGAGAAGTGCAACGAACTATTCCTCGGGATTCTACAAACTTTACTTCGACAACGACAACGTTCTTCGCTTACTCTACAAAGGTCACACATTTTCTAGCGTGTACTGGCCAGCATCGTGGCAGCTTCCAATTGACATAGGCAGATCCACCTACAATGTAACCAAAACCGCTTTCTTAGATTCCTTCGGACGCTTCACTTCCTCTGATGGGTATCAATTCCGCTCCACAGATTATCCCAAAACGGTGTACAGGAGACTGACGATGGATTCTGATGGTAATTTGCGTGTGTATAGCTTCAACGACGAGCGCAAGACGTGGGAAGTGAAGTGGCAAGTTATTACCCAGCCGTGTACCATTCATGGCATTTGTGGACCTAACAGCATGTGCCATAATGATCCATTTATTGGAAGGACTTGCTATTGTTTGAAAGGGTTTAAGGTTAAGGATCCTAATGACTGGACTCAGGGGTGTGAGCCTGAGTTTCTTCTTTCTGATTTTTCTTGCAACAGTGGCCAATCTTTGGGTTTTCTCTATCTTCGAACCACGGAATTCTATGGCTATGACTGGAACGTGACACGCGTTTCGAGCTTAAAGGAATGCCAGAATATATGTCTGGCACTTTGTGATAAATGTGTAGCTGTTCAATTGAAGTTTAACGAGTTCACTACTTATAATTGCTACCCGAAAACGATGGCATTCAACGGACGGGATAGTCCTAATTTCGATGGAGAGATCTATCTAAAGTTGCCGAATACGATTTTGCGCTCGTCCACGAAGTTTCTAAATCATTCCCGGATGAATTGCCCTGTTGGTTTGTCTAAACAGTTGAATAGAATTTATCAACAGCCAGAAAAAAACTCCACGTTGAGTTTCTTGGTCTGGTTTGTTTGCGGGATCGGGGTGTTTGAGTTTTCCACCATTTTCCTCGTGTGGTTCTTCTTGTTGAGAACAAGCAAGCACCCAGACACGGTGGATCAAAAACGACAACTTCTTTCTGCCACAGGGTTTCAGAGGTTCACCTACGCAGAGCTAAAATCCGCAACAAGAGGGTTCAAAGAAGAGGTTGGGCGAGGAGCAGGAGGTGTTGTTTACAAAGGTACATTATATGATGGCCGTGTTGCGGCTATTAAACGCTTAAACGAGGCTACTCAGGGAGAAGCTGAATTTTTGGCTGAAATAAGCACAATTGGCATGCTGAACCACATGAATTTGATTGACATGTGGGGGTACTGCGTTGAAGGGAAGCACAGGCTTTTGGTGTATGAGTACATGGAACATGGATCCTTAGCGGACAAGCTCTTAACTAGCGCACTTGATTGGAAGAAAAGGTTCAACGTTGCAGTGGGCACGGCGAAAGGTTTGGCTTACTTACACGAAGAGTGTTTGGAGTGGATTTTGCATTGCGATGTGAAGCCTCAAAACATTCTCCTTGACTCAGATTTCCAACCCAAGGTAGCAGATTTCGGGTTGTCAAAACTCTTAAACAGAGACGAGCGTGGGAATTCAAGTTTTTCACGAATAAGAGGGACTCGAGGGTACATGGCTCCAGAGTGGGTTTACAATCTTCGGATCACTTCTAAGGTTGATGTCTATAGCTATGGGATTGTGGTGCTGGAAATGGTGAGTGGAAGAAGTCCCATGGCAATCCATAGTCTGGAGAATAGTGGGGGCATAGAGCAGCGTCGGCTGGTGACGTGGATAAGCGAGAAGATAAAGCATGCACCCACTTGTGCGTTTTGGATTGAGGAGATAATTGATCCTAACTTGGAAGGAAACTACGACGTTTCACAAGTAGAGGCTTTGGTTAAAGTGGCTCTGGAGTGTGTGCAAGATGACATGAATGAAAGACCATCCATGAGCCAAGTTGCAGAGATGCTCCAGGCCCGTGAAAATAAAATCCTCCCTCGCTAG 2418 0.457 MQLLLSRAMHINLFLLLLFISTSSAATDTLSEGSSLSVEKQVDTLLSSNGDFSASFFQVGENAFCFSVCFTRSERPTVVWMANRDEPVNGKGSFLSLWKNGNLVLTDAGETVIWSTATFSSSQLHLKLRNNGNLVLLTSEGIIIWQSFDFPTDTLLPTQPLKERVALVSSRSATNYSSGFYKLYFDNDNVLRLLYKGHTFSSVYWPASWQLPIDIGRSTYNVTKTAFLDSFGRFTSSDGYQFRSTDYPKTVYRRLTMDSDGNLRVYSFNDERKTWEVKWQVITQPCTIHGICGPNSMCHNDPFIGRTCYCLKGFKVKDPNDWTQGCEPEFLLSDFSCNSGQSLGFLYLRTTEFYGYDWNVTRVSSLKECQNICLALCDKCVAVQLKFNEFTTYNCYPKTMAFNGRDSPNFDGEIYLKLPNTILRSSTKFLNHSRMNCPVGLSKQLNRIYQQPEKNSTLSFLVWFVCGIGVFEFSTIFLVWFFLLRTSKHPDTVDQKRQLLSATGFQRFTYAELKSATRGFKEEVGRGAGGVVYKGTLYDGRVAAIKRLNEATQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMEHGSLADKLLTSALDWKKRFNVAVGTAKGLAYLHEECLEWILHCDVKPQNILLDSDFQPKVADFGLSKLLNRDERGNSSFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMVSGRSPMAIHSLENSGGIEQRRLVTWISEKIKHAPTCAFWIEEIIDPNLEGNYDVSQVEALVKVALECVQDDMNERPSMSQVAEMLQARENKILPR* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02123 805 Pfam D-mannose binding lectin 77 162 IPR001480 -
Lapu9g02123 805 CDD B_lectin 44 151 IPR001480 -
Lapu9g02123 805 FunFam Serine/threonine-protein kinase 593 802 - -
Lapu9g02123 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Lapu9g02123 805 PIRSF SRK 1 805 IPR024171 GO:0004674
Lapu9g02123 805 Gene3D - 152 295 - -
Lapu9g02123 805 Gene3D Phosphorylase Kinase; domain 1 485 592 - -
Lapu9g02123 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 207 IPR036426 -
Lapu9g02123 805 ProSiteProfiles Protein kinase domain profile. 518 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02123 805 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Lapu9g02123 805 CDD STKc_IRAK 524 796 - -
Lapu9g02123 805 ProSiteProfiles Bulb-type lectin domain profile. 21 149 IPR001480 -
Lapu9g02123 805 SUPERFAMILY Protein kinase-like (PK-like) 496 796 IPR011009 -
Lapu9g02123 805 PANTHER OS07G0415500 PROTEIN 12 797 - -
Lapu9g02123 805 Gene3D Transferase(Phosphotransferase) domain 1 593 803 - -
Lapu9g02123 805 Gene3D - 21 149 IPR036426 -
Lapu9g02123 805 FunFam S-receptor-like serine/threonine-protein kinase 487 592 - -
Lapu9g02123 805 SMART blect_4 36 151 IPR001480 -
Lapu9g02123 805 Pfam Protein kinase domain 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02123 805 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Lapu9g02123 805 Pfam S-locus glycoprotein domain 246 317 IPR000858 GO:0048544
Lapu9g02123 805 SMART serkin_6 518 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02123 Lapu-Chr9 35943669 35946086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02123 444 795 Receptor kinase-like Gene Family AT3G58690 35.544 3.86e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu9g02123 Pkinase 2.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02123 - - gmx:100816469 1304.66