Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02122 ATGACCACCACCTATAAGGTAAAGTTTGGAAATCACGCACAATTATGTATCCTTTCCAGAGCAATGGAGGTCATGCTCTTCGATCTTCTCCTCTTGCTTCTCCTCTTCGTTTCAGCTACATATGCAGTCACAGATACACTTCCAGAAGGTTCGTCACTTTCAGTAGAGAAACAGAGTGATACCCTAATTTCATCCAACGGCGATTTCTCCGCTGGCTTCTTCCAAGTTGGTGACAATGCCTTTTGCTTCTCCGTGTGCTTCACACGCTCCAAACAGCCCACCGTTTTATGGATGGCCAACCGTGACAAGCCCGTCAACGGCAAAGGCTCATTCCTCTCACTCTGGAAAAACGGCAACCTCGTTTTGACGGAGGCGGGAGGAACCCTTATCTGGTCGACCTCAACACCCTCCTCCTCCCAACTTCATCTGAAGCTAGGAAACAACGGCAACCTCCTTCTCCTCACTTACGAAGGCACCACCATTTGGCAAAGCTTCGATTCCCCAACAGACACACTTCTTCCAATGCAACCACTCACGGATAAGGCGAGCCTCGTTTCATCCAGAAGCGCAACGGAACATTCTTCGGGATTCTACAAAATTTACTTCGACAACAACAACGCTCTTCGCTTACTCTACAAAGGTCCCACGCTTTCCAGTGAGTACTGGCCTCCTCCGTGGGGGCTTTTAAGTGACCAGGGCAGATTCACGTACAATATAACCAGAACGGCTTTGTTAAAAACCTCCGGATTATTCACTTCCTCTGATGGGTTTCAATTCTGCTCCACTGATTGTTCCAAAAATGTATACAGAAGACTCAAGGTGGATTCTGATGGTAACTTTCGTTTGTATAGCTTCAACGAAGATTCTAAGATGTGGGAGGTGACGTGGCAAGCTATTTCCCAGACGTGTTCCGTTCATAGCATTTGTGGACCTAACAGCATGTGCAGTTATGATCCTGTTATTGGAAGGTCTTGTTATTGTTTGAAAGGGTTTAAGGTTAAGGATCCTAATGACTGGACTCAGGGATGTGAGCCTGAGTTTGATCCTTCTCATTTTTCTTGCAAAAGTGGCGAGTCTTTCGGTTTTCTCCATCTTCCAAACGCGGATCTGTATGGCTATGACTGGAACGTGACACGCGTTTCGAGCTTAAAGGAATGCCAGAATCTCTGTCTGGCACTTTGTGATAAATGTTTAGCTGTTCAGTTAAAGTTTAACGAGATTAGTACTTATAATTGTTACCTGAAAACGATGGTATTCAATGGACAACGTAGTCCAAATTTTGACGGAGATATATATATAAAGTTGCCGAATGCGATTTTGCGCTCGTCCACGAAGATTCTAAATCATTCCCGGATGAACTGCCCCGTTGGTTGGTCTCAACAGTTGAAACCTCCTCCTGTAGTAAACTCCACGGTGAATTTCTTGGTGTGGTTCGCCTGCGGGGTCGGGGCGCTTGAGTTTTCCATTATTTTCCTCGTGTGGTTCTTCTTGTTCAGAACAAGTAAGCACCCTGACACGCTGGATCAACAACGATACCTTCTTACTGCCACGGGGTTTCAGAGGTTCACCTACGCAGAGCTAAAAACCGCAGCAAAAGGGTTCAAAGAAGAGGTTGGGCGAGGAGCAGGAGGCGTTGTTTTCAAAGGGGCATTATATGATAACCGTGTTGCGGCTATTAAACGCTTAGACGAAGCTAAGCAAGGAGAAGCTGAATTTTTGGCTGAAATAAGAACAATTGGCATGCTGAACCACATGAATTTGATTGACATGTGGGGGTACTGCGTTGAAGGGAAGCACAGGCTTTTGGTGTATGAGTACATGGAACATGGATCCTTAGCAGACAATCTCTTTGCCAATGCACTTGATTGGAAGAAAAGGTTCAACATTGCTGTGGGCACAGCGAAAGGTTTGGCTTACTTGCACGAAGAGTGTTTGGAGTGGATTTTGCATTGCGACGTGAAGCCTGAGAACATTCTCCTAGACTCCGATTTCCAACCCAAGGTAGCGGATTTCGGCTACGGGATTGTGGTGCTGGAAATGGTGAGCGGAAGAAGTCCCATGGCAATCCATAGTCTGGAGAACAGTGGGGCCATAGAGCAGTGTCGGCTGGTGACGTGGATAAGGGAGAAGATAAAGCATGCAGAGACTAGTGCGTTTTGGATCGAGGAGATAGTTGATCCCAACTTGGAACAAAACTACGACGTTTCAGAAGTTGAAGTTTTGGTTAAAGTGGCTTTGCAGTGCGTGCAAGATGACATGAATAAAAGACCATCCATGAGCCAAGTTGCAGAGATGCTCCAGTCCCATTGA 2310 0.4623 MTTTYKVKFGNHAQLCILSRAMEVMLFDLLLLLLLFVSATYAVTDTLPEGSSLSVEKQSDTLISSNGDFSAGFFQVGDNAFCFSVCFTRSKQPTVLWMANRDKPVNGKGSFLSLWKNGNLVLTEAGGTLIWSTSTPSSSQLHLKLGNNGNLLLLTYEGTTIWQSFDSPTDTLLPMQPLTDKASLVSSRSATEHSSGFYKIYFDNNNALRLLYKGPTLSSEYWPPPWGLLSDQGRFTYNITRTALLKTSGLFTSSDGFQFCSTDCSKNVYRRLKVDSDGNFRLYSFNEDSKMWEVTWQAISQTCSVHSICGPNSMCSYDPVIGRSCYCLKGFKVKDPNDWTQGCEPEFDPSHFSCKSGESFGFLHLPNADLYGYDWNVTRVSSLKECQNLCLALCDKCLAVQLKFNEISTYNCYLKTMVFNGQRSPNFDGDIYIKLPNAILRSSTKILNHSRMNCPVGWSQQLKPPPVVNSTVNFLVWFACGVGALEFSIIFLVWFFLFRTSKHPDTLDQQRYLLTATGFQRFTYAELKTAAKGFKEEVGRGAGGVVFKGALYDNRVAAIKRLDEAKQGEAEFLAEIRTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMEHGSLADNLFANALDWKKRFNIAVGTAKGLAYLHEECLEWILHCDVKPENILLDSDFQPKVADFGYGIVVLEMVSGRSPMAIHSLENSGAIEQCRLVTWIREKIKHAETSAFWIEEIVDPNLEQNYDVSEVEVLVKVALQCVQDDMNKRPSMSQVAEMLQSH* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02122 769 FunFam Protein kinase superfamily protein 607 675 - -
Lapu9g02122 769 Pfam D-mannose binding lectin 94 179 IPR001480 -
Lapu9g02122 769 PANTHER OS07G0415500 PROTEIN 29 672 - -
Lapu9g02122 769 SMART serkin_6 532 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02122 769 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Lapu9g02122 769 SUPERFAMILY Protein kinase-like (PK-like) 508 766 IPR011009 -
Lapu9g02122 769 SMART blect_4 53 168 IPR001480 -
Lapu9g02122 769 CDD PAN_AP_plant 353 436 - -
Lapu9g02122 769 Gene3D Transferase(Phosphotransferase) domain 1 673 769 - -
Lapu9g02122 769 Gene3D Phosphorylase Kinase; domain 1 499 606 - -
Lapu9g02122 769 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 223 IPR036426 -
Lapu9g02122 769 Pfam Protein kinase domain 535 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02122 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Lapu9g02122 769 FunFam S-receptor-like serine/threonine-protein kinase 501 606 - -
Lapu9g02122 769 Gene3D Transferase(Phosphotransferase) domain 1 607 672 - -
Lapu9g02122 769 Pfam S-locus glycoprotein domain 262 334 IPR000858 GO:0048544
Lapu9g02122 769 ProSiteProfiles Bulb-type lectin domain profile. 38 166 IPR001480 -
Lapu9g02122 769 SMART ntp_6 357 435 IPR003609 -
Lapu9g02122 769 PIRSF SRK 17 672 IPR024171 GO:0004674
Lapu9g02122 769 PIRSF SRK 673 769 IPR024171 GO:0004674
Lapu9g02122 769 ProSiteProfiles PAN/Apple domain profile. 354 436 IPR003609 -
Lapu9g02122 769 ProSiteProfiles Protein kinase domain profile. 532 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02122 769 Gene3D - 38 167 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02122 Lapu-Chr9 35937002 35939440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02122 484 767 Receptor kinase-like Gene Family AT3G53810 35.928 8.60e-50 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu9g02122 Pkinase 3.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02122 - - gmx:100816469 1143.64