Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02121 ATGTGGTTCATCCTCCTCTCTCTTGTTATGTCTCTGCAACTTTCATCTTCAGCAGTAGAAATCATGCATCAAGGTTCTTCCCTCTCAGTGGATGACCCCAATGATGTCATGCACTCACCTGACGCCATCTTCTGTGCCGGTTTCTATGCCGTTGGCCAAAACGCATATTCCTTCGCAGTTTGGTTCTCCCAACCCTACGGCCAAACCCCAAATGCAACCGTCGTATGGATGGCGAACCGAGACTACCCCGTAAACGGTAAGGGCTCCAAGCTTTCCCTTCTTCACAACGGCAACCTCGCCTTAAACGACGCTGACGAATCCCACGTTTGGTCCACAAATACCGTTTCGCTGTCGTCTGTGCAACTGTTTCTCGACAACACTGGCAACCTCGTTCTGCGTGAAACGAAGGCTGGCGGAGTCGTTTTGTGGCAGAGCTTTGATTTCCCAACGGACACGCTTTTGCCTCAACAAGTGTTCACGAGATACGCGAAACTGGTGTCTTCTAGAAGCGAGACCAACAAGTCCTCCGGTTTCTACACCTTGTTCTTCGACAACGACAACATTCTTCGTCTTCTTTACGATGGTCCTGAAGTTTCTGGCCTTTACTGGCCGGATCCATGGTTGGCCACTTGGGACGCTGGACGTACCGCTTACAACAATAGCAGAGTTGCGGCGATGGATACACTCGGCAATTTTAGTTCTTCGGATGATTTCTCTTTTCTGACATCTGATTCTGGCACTGTGAACCAAAGAAGATTAGTGCTTGATCATGATGGAAACATTCGTGTTTATAGTCGCGGACATGGTGGAGAGAAGTGGTCTATCACGTGGCAAGCCAAAGCAAGACCGTGTAGTATTCATGGTATTTGTGGCCCTAACAGTCTGTGCTCTTACCATCAAAATTATAGTGTGAAGTGCTCTTGCCTTCCTGGGTATAAGTGGAAGAATGATCACGACTGGTCTTATGGGTGTGAACCAAAATTCTCTACGCTTTGCAACAAAACCGAGTCTCGGTTTTTGCGTATAAACAACGTGGAGTTATATGGCTACGACTACGGGATTATCACAAATTACACTCTCCATCAGTGTCAGGAGTTATGCCTTCAATTATGCAACTGTAAAGGCATCCAGTATACATATGTCTTTGGCAGTGGCACTTATACTTGTTACCCGAAGTTGCAGTTGCGGAATGCGTATCGGACACCGTATTTCAACGCTGATTTGTACTTGAAACTACCAGCAAATAGTTCATATTCTTTTGAGGGATTCACACACGAGCACAGTCTTGATTGTTCCTCGAGTTCGAGGATGGTGCAGCTTGAGAGAGCATATGACATGAGTCATGAAAGCAGATATGTTAAGTTCTTGCTTTGGTTTGTAGGGGGAGTGGGGGCATTTGAAGTTTTGTTCATATTTGTTATTTGTTTTTTTCTGGTGAGAACAAGGGAGCGAAAATATTCTGGTGTAGATAGACGAGTCTATAATATGGCCATGAATGGTTTTAGAAAGTTCAGTTATTCTGAACTGAAACAAGCCACCAAAGGGTTTCGTGAAGAGATAGGAAGGGGTGCAGGAGGGGTTGTATTTAAAGGCGTGTTGTTGGATCAACGAGTTGCGGCTGTGAAGAGACTCAAGGATGCTAGTCAAGGAGAAGAAGATTTCTTCGCAGAAGTAAGCAGCATTGGAAGGCTTAACCATATGAACTTGATTGAGATGTGGGGGTATTGTGCTGAGGGAAAACATAGACTATTGGTGTATGAGTACATGGAGCATGGGTCTCTAGCACAAAATATGGAGTCCAATGCATTGGACTGGACCAAAAGGTTTGACATAGCCTTAGGTACAGCAAGAGGGTTGGCTTATATTCACGAGGAGTGTTTAGAGTGGATTCTACACTGTGATGTAAAGCCCCAAAACATACTTCTAGGTTCTAACTATCATCCGAAGGTAGCGGATTTTGGGCTGTCCAAACTGCGAAACAGAAATGATACTACTCCACACTCTAGTTTTTCAAGGATACGAGGAACAAGAGGTTACATGGCTCCTGAGTGGGTTTTAAACCTACGAATCACGGCCAAAGTTGATGTTTATAGCTATGGAATTGTTGTTTTGGAAATGGTGACCGGAAAGAGTGCAACAAAGGATGTTGATGGCACTGATAATGGAGTGGAGCAGCAGCATCTTAGCATGGTCGCGTGGCTTAAAGAGAAACAGAAAAATGGAAGTGGTTGGGTTAGTGAAATCTTGGAACCCAATGTAGAAGGAGTTTATGATGAGGATAAAATAGAAACTTTGGTTAGAGTGGCTCTGCAATGCGTTGAGGAAGAAAAGGACAAGAGACCCACCATGAGTCAAGTAGTAGAGATGCTTCAGAAATGTAGCCGCGAAGATCAACATCTGTGA 2403 0.449 MWFILLSLVMSLQLSSSAVEIMHQGSSLSVDDPNDVMHSPDAIFCAGFYAVGQNAYSFAVWFSQPYGQTPNATVVWMANRDYPVNGKGSKLSLLHNGNLALNDADESHVWSTNTVSLSSVQLFLDNTGNLVLRETKAGGVVLWQSFDFPTDTLLPQQVFTRYAKLVSSRSETNKSSGFYTLFFDNDNILRLLYDGPEVSGLYWPDPWLATWDAGRTAYNNSRVAAMDTLGNFSSSDDFSFLTSDSGTVNQRRLVLDHDGNIRVYSRGHGGEKWSITWQAKARPCSIHGICGPNSLCSYHQNYSVKCSCLPGYKWKNDHDWSYGCEPKFSTLCNKTESRFLRINNVELYGYDYGIITNYTLHQCQELCLQLCNCKGIQYTYVFGSGTYTCYPKLQLRNAYRTPYFNADLYLKLPANSSYSFEGFTHEHSLDCSSSSRMVQLERAYDMSHESRYVKFLLWFVGGVGAFEVLFIFVICFFLVRTRERKYSGVDRRVYNMAMNGFRKFSYSELKQATKGFREEIGRGAGGVVFKGVLLDQRVAAVKRLKDASQGEEDFFAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEHGSLAQNMESNALDWTKRFDIALGTARGLAYIHEECLEWILHCDVKPQNILLGSNYHPKVADFGLSKLRNRNDTTPHSSFSRIRGTRGYMAPEWVLNLRITAKVDVYSYGIVVLEMVTGKSATKDVDGTDNGVEQQHLSMVAWLKEKQKNGSGWVSEILEPNVEGVYDEDKIETLVRVALQCVEEEKDKRPTMSQVVEMLQKCSREDQHL* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02121 800 Gene3D - 17 148 IPR036426 -
Lapu9g02121 800 Pfam S-locus glycoprotein domain 235 315 IPR000858 GO:0048544
Lapu9g02121 800 Gene3D - 150 280 IPR036426 -
Lapu9g02121 800 FunFam S-receptor-like serine/threonine-protein kinase 483 588 - -
Lapu9g02121 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Lapu9g02121 800 SMART blect_4 28 149 IPR001480 -
Lapu9g02121 800 Gene3D Transferase(Phosphotransferase) domain 1 589 799 - -
Lapu9g02121 800 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Lapu9g02121 800 ProSiteProfiles Bulb-type lectin domain profile. 19 145 IPR001480 -
Lapu9g02121 800 ProSiteProfiles Protein kinase domain profile. 514 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02121 800 SMART ntp_6 334 412 IPR003609 -
Lapu9g02121 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 197 IPR036426 -
Lapu9g02121 800 Pfam D-mannose binding lectin 73 161 IPR001480 -
Lapu9g02121 800 Gene3D Phosphorylase Kinase; domain 1 479 588 - -
Lapu9g02121 800 SMART serkin_6 514 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02121 800 Pfam PAN-like domain 332 389 IPR003609 -
Lapu9g02121 800 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Lapu9g02121 800 CDD STKc_IRAK 520 792 - -
Lapu9g02121 800 CDD PAN_AP_plant 333 413 - -
Lapu9g02121 800 FunFam Serine/threonine-protein kinase 150 277 - -
Lapu9g02121 800 FunFam Putative receptor protein kinase ZmPK1 16 148 - -
Lapu9g02121 800 Pfam Protein kinase domain 518 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02121 800 SUPERFAMILY Protein kinase-like (PK-like) 493 791 IPR011009 -
Lapu9g02121 800 CDD B_lectin 38 149 IPR001480 -
Lapu9g02121 800 PIRSF SRK 1 800 IPR024171 GO:0004674
Lapu9g02121 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 589 799 - -
Lapu9g02121 800 PANTHER OS07G0415500 PROTEIN 5 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02121 Lapu-Chr9 35927512 35929942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02121 459 790 Receptor kinase-like Gene Family AT1G56120 40.176 6.59e-62 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu9g02121 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02121 - - gmx:100792388 1341.25