Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02114 ATGGAAACTCGCGCTGCAGCAAAGAGAAAGAGAAAGGAGACTTTTGTGGTTGTGGAAAAGCAACACCCCAAGAAGCATCGGGTTGTATTGGGTGAGCTTTCCAATCTACAAAATCGCATTGTTCCTGAAATTCAAAATCTGCGCAAAGGGAAAAGACAAGGTTGGAAGAATACCGCTATCAAGAAATCGTCTCACCTAAACAATACCCTTTCTTTTTCTTCCACCCAGATTGACCAACATTATGTTTCCGACATCGATGAGTATCTTCGTGCAATGGAGATGCAGACAAAGAGAAGACCATTGGTTAACTACATGGACAAGGTTCAGTCTGTAGTTACCACAAACATGAGAGAAATATTGGTAGATTGGTTAGTAGATGTTGCTGTGGAGTATAAGCTTCTCTCTGAAACTCTTCATCTTTCTGTGTCATATATAGACAGATTTTTATCGGTCAGTCCTGTAACCAAATTGAGACTTCAATTACTCGGTGTTTCTTCCATGCTCCTTGCTTCGAAGTATGAGGAAACTGATCCACCCCGTGTGGAAAAATTCTGCAGCATCACTGATAACACTTATGAGAAGGAAGAGGTTGTAAAGATGGAGGCTGAAATACTTGAGTCCCTAAACTTTGAAATGGGCAATCCCACTGCAATCACTTTTCTAAAACGATTTTTGGGTGTTGCCTATGTGAACCAAAAAACACCAAATTTGAAGATTGAGTTTCTGAGCTTCTATCTTGCTGAGCTAAGTTTGTTGGATTATGATTGTATAAGATTCTTGCCTTCTACTATAGCTGCATCGGCTTTATTTCTTGCCAGGTTTATTGTCTCTCCTGAAATGCATCCTTGGACTTCTTCCCTGAGTGAATGGTCAGGTTACAGACCTGTTGAATTGAAAGTTTGTGTTCTCACTTTACATGACTTGTATTTTTCAAGAAAGGCAGCATCCTTCCAATCTGTTAGGGATAAATATAAGCAGCACAAGTTCAAGTATGTGGCAAACCTGCCGTCTCCTCCACACGTTCCAAGTTATTACTTTGAAGATGACAACTCTTGA 1056 0.4025 METRAAAKRKRKETFVVVEKQHPKKHRVVLGELSNLQNRIVPEIQNLRKGKRQGWKNTAIKKSSHLNNTLSFSSTQIDQHYVSDIDEYLRAMEMQTKRRPLVNYMDKVQSVVTTNMREILVDWLVDVAVEYKLLSETLHLSVSYIDRFLSVSPVTKLRLQLLGVSSMLLASKYEETDPPRVEKFCSITDNTYEKEEVVKMEAEILESLNFEMGNPTAITFLKRFLGVAYVNQKTPNLKIEFLSFYLAELSLLDYDCIRFLPSTIAASALFLARFIVSPEMHPWTSSLSEWSGYRPVELKVCVLTLHDLYFSRKAASFQSVRDKYKQHKFKYVANLPSPPHVPSYYFEDDNS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02114 351 FunFam Cyclin superfamily protein, putative 212 284 - -
Lapu9g02114 351 Pfam Cyclin, N-terminal domain 87 212 IPR006671 -
Lapu9g02114 351 ProSitePatterns Cyclins signature. 117 148 IPR006671 -
Lapu9g02114 351 SMART Cyclin_C_2 215 338 IPR004367 -
Lapu9g02114 351 PANTHER CYCLINS 61 326 IPR039361 -
Lapu9g02114 351 SUPERFAMILY Cyclin-like 76 212 IPR036915 -
Lapu9g02114 351 Gene3D - 84 334 - -
Lapu9g02114 351 Pfam Cyclin, C-terminal domain 215 337 IPR004367 -
Lapu9g02114 351 PIRSF Cyclin_A_B_D_E 1 345 IPR046965 GO:0016538|GO:0044772
Lapu9g02114 351 Gene3D - 98 213 - -
Lapu9g02114 351 SUPERFAMILY Cyclin-like 215 340 IPR036915 -
Lapu9g02114 351 FunFam G2/mitotic-specific cyclin 100 211 - -
Lapu9g02114 351 CDD CYCLIN_AtCycA-like_rpt2 215 329 - -
Lapu9g02114 351 SMART cyclin_7 122 206 IPR013763 -
Lapu9g02114 351 SMART cyclin_7 219 307 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02114 Lapu-Chr9 35880291 35882694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02114 3 350 Core Cell Cycle Gene Families AT5G43080 54.131 8.18e-125 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02114 K06627 - gmx:100786875 523.857