Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02109 ATGAGTGCTCCGTCACGAGAAGAGGAGTCCAAGAGGGAGGAGAGAGACGAGGAGGCGAACCGGCTTCTAGGGGAAGCAGTAGCCGCATCATCGGAAGAAGATGTGGCATACGAAGCGGGGGAGAAGATCCTGGTGGCGGATTTCGATTTTGACACGGTGGACGATGCGACCGTTCCTCCTTTCTCATGGAAGAAGCTGTGGCTCTTCACTGGGCCTGGGTTCTTGATGAGCATAGCTTTTTTGGATCCAGGGAATCTCGAGGGGGATCTTCAGGCTGGGGCCATCGCGGGCTACTCGTTGCTCTGGCTCTTGATGTGGGCTACCTTCATGGGCCTCTTGATCCAGCTTCTGTCCGCCAGAGTCGGGGTCGCCACGGGCCGCCACCTTGCCGAGCTCTGTAGGGATGAGTATCCCAATTGGGCTCGCCTTGTTCTCTGGTTCATGGCCGAGCTGGCCCTGATTGGCGCCGACATTCAAGAGGTCATTGGAAGTGCCATCGCCATCCAAATTCTTAGCCGAGGCTTCTTCCCTCTCTGGGCTGGAGTTCTAATCACTGCGTCCGATTGCTTTTTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGGAGTTCTCATTGGTGTTATGGGTCTTTCTTTTGCCTGGATGTTTGCTGATGCAAGACCTAATAGACAAGAGCTTTTAATGGGTATTTTGATTCCGAGACTAAGCTCAAAAACAATTCGTCAGGCTGTGGGTGTTGTGGGTTGTGTTATTATGCCTCACAATGTATTCCTTCATTCTGCTTTGGTTCAATCAAGGAAGGTTGATCCTAATAAGAAAGGTCGGGTACAGGAGGCTCTCAACTACTATTCAATTGAGTCATCAGCTGCACTTTCAGTCTCCTTCATCATCAATCTATTTGTCACAACAGTTTTTGCTAAGGGTTTTTATGGAACAAAGCAGGCAAAAAGCATAGGACTGGTCAATGCAGGGCAGTATCTTGAAGAAAAGTATGGAGGAGGAGTCTTCCCTATTCTTTATATATGGGGAATTGGGTTATTGGCTGCTGGGCAGAGCAGCACCATCACTGGCACATATGCTGGGCAATTCATAATGGGGGGTTTCCTCAACCTTCGTTTAAAGAAATGGTTGAGAGCATTGATCACCCGAAGTTTTGCAATTGTGCCAACTATAATTGTAGCTATAGTTTTTAATAGATCAGAAGCGTCCTTGGATATTTTGAATGAATGGCTCAATGTGCTTCAGTCCATGCAAATTCCCTTTGCTCTGATTCCCCTCCTCACGTTGGTCTCCAAAGAGCAGGTCATGGGAACCTTTAGAGTTGGACCTGTTCTTGAGAGAGTAGCGTGGACTGTTGCTGGACTGATAATAGTAATTAATGGGTATCTCTTGTTAGATTTCTTCATTTCTGAGGTGAATGGCATCTTGCTTGGTCTTTTAGCCTGCTCCTGTACGACAGCCTATATTGCGTTCATTGTATATTTGGTTTCACAGAGTGGTATTCTTCCTTCTGCATGGGTTAATCGTCTTCCCAAGGGGTTTTCTTCAACCGGGAATTAA 1578 0.4728 MSAPSREEESKREERDEEANRLLGEAVAASSEEDVAYEAGEKILVADFDFDTVDDATVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASDCFFFLFLENYGVRKLEAAFGVLIGVMGLSFAWMFADARPNRQELLMGILIPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKVDPNKKGRVQEALNYYSIESSAALSVSFIINLFVTTVFAKGFYGTKQAKSIGLVNAGQYLEEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIIVAIVFNRSEASLDILNEWLNVLQSMQIPFALIPLLTLVSKEQVMGTFRVGPVLERVAWTVAGLIIVINGYLLLDFFISEVNGILLGLLACSCTTAYIAFIVYLVSQSGILPSAWVNRLPKGFSSTGN* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02109 525 NCBIfam Nramp family divalent metal transporter 71 440 - -
Lapu9g02109 525 Pfam Natural resistance-associated macrophage protein 87 448 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 Hamap Divalent metal cation transporter MntH [mntH]. 52 474 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 PRINTS Natural resistance-associated macrophage protein signature 249 272 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 PRINTS Natural resistance-associated macrophage protein signature 384 401 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 PRINTS Natural resistance-associated macrophage protein signature 175 194 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 PRINTS Natural resistance-associated macrophage protein signature 418 437 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 PRINTS Natural resistance-associated macrophage protein signature 356 375 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 PRINTS Natural resistance-associated macrophage protein signature 145 171 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 PRINTS Natural resistance-associated macrophage protein signature 200 221 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 64 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lapu9g02109 525 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 21 503 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02109 Lapu-Chr9 35843199 35847538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02109 1 505 Inorganic Solute Cotransporters AT1G47240 77.318 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02109 K21398 - gmx:100795013 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02109 9 35843199 35847538 Lapu9g02109 9 35843199 35847538 ECH