LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu9g02101	ATGAATGAAGCGGAGGAGCAACTGCGCGAGGCGGCGAGGAAGGGTGACACGGAGAAAGTGAGGGCTCTCATAGACTCCGGCGCCGATGTTTCCCACTTCGACGGCGAGGGCCTCAATCCTCTCATGCACGCCGCAAAGCACGGCCATGCACCCGTCCTCACCCTCCTCCTCTCCGCCGGCGCTCCCTGGAACGCCCTCTCTCCCTCCAGCCTCTCGGCTGGCGACTACGCCATGCAGGAAGGCCACAGCGAAGCCTTCGACCTTCTCCTCAACGCCGGGATTCAAGCCGAACTTATTCTGGGAACAATTGCGAGGAAGGAAAACAAAAGCGCTGATTCCGGTGTCGATTATTTGGAAGATAGGGTGAGTTTTAGCGAAGACAAGCTTATGGACTCTGAAAGCAAAGCTGTGATGATGGCGTGGGAGAAGCCGTTGATGGAGGCTCATGCCAAAGCTGTTTGTTCGGCAGGGGGGCACGTGCTCAATATAGGGTTCGGAATGGGGCTCGTGGATTCGGCCATTCAGCAGTATGCACCTGCATCACACACCATCGTTGAGGCTCATCCGGAGGTGTATCAACGCATGCTTCGCTCCGGTTGGGGTCAGAAGGAAAATGTGAAGATAGTTTTTGGGCGCTGGCAGGATGTTCTGTCTCAGCTTGAAACGTATGATGGAATATTCTTTGACACCTATGGGGAGTACTACGAAGATTTGAGGGAGTTCCACCAACATCTCCCAACACTCTTGAAGCCTGGTGGTATCTACTCATTCTTCAATGGCCTTTGTGGCAGTAATGCATTTTTCCATGTTGTTTACTGCCATTTGGTATCACTCGAGCTTGAGAATTTGGGGTATTCCGCGCAGTTAATTCCATTGCCTGTTAAGGATTGTTTAGGAGAACAAGTTTGGGAAGGCGTGAAACAAAGATATTGGCAACTCGATACGTACTACCTTCCTGTCTGTCAGTCTGTAGAAGACCCTGAATGA	987	0.5208	MNEAEEQLREAARKGDTEKVRALIDSGADVSHFDGEGLNPLMHAAKHGHAPVLTLLLSAGAPWNALSPSSLSAGDYAMQEGHSEAFDLLLNAGIQAELILGTIARKENKSADSGVDYLEDRVSFSEDKLMDSESKAVMMAWEKPLMEAHAKAVCSAGGHVLNIGFGMGLVDSAIQQYAPASHTIVEAHPEVYQRMLRSGWGQKENVKIVFGRWQDVLSQLETYDGIFFDTYGEYYEDLREFHQHLPTLLKPGGIYSFFNGLCGSNAFFHVVYCHLVSLELENLGYSAQLIPLPVKDCLGEQVWEGVKQRYWQLDTYYLPVCQSVEDPE*	329

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu9g02101	328	Gene3D	Vaccinia Virus protein VP39	108	323	IPR029063	-
	Lapu9g02101	328	FunFam	Arginine N-methyltransferase 2	104	323	-	-
	Lapu9g02101	328	PIRSF	Rmt2	1	116	IPR017408	GO:0016274
	Lapu9g02101	328	PIRSF	Rmt2	104	325	IPR017408	GO:0016274
	Lapu9g02101	328	Coils	Coil	1	21	-	-
	Lapu9g02101	328	ProSiteProfiles	Ankyrin repeat profile.	36	68	IPR002110	GO:0005515
	Lapu9g02101	328	SUPERFAMILY	Ankyrin repeat	8	96	IPR036770	-
	Lapu9g02101	328	FunFam	Protein arginine N-methyltransferase 2	1	101	-	-
	Lapu9g02101	328	CDD	AdoMet_MTases	160	255	-	-
	Lapu9g02101	328	Pfam	Ankyrin repeats (3 copies)	10	95	IPR002110	GO:0005515
	Lapu9g02101	328	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	121	321	IPR029063	-
	Lapu9g02101	328	SMART	ANK_2a	36	65	IPR002110	GO:0005515
	Lapu9g02101	328	SMART	ANK_2a	3	32	IPR002110	GO:0005515
	Lapu9g02101	328	SMART	ANK_2a	69	98	IPR002110	GO:0005515
	Lapu9g02101	328	ProSiteProfiles	Ankyrin repeat profile.	3	35	IPR002110	GO:0005515
	Lapu9g02101	328	ProSiteProfiles	Ankyrin repeat region circular profile.	36	61	-	-
	Lapu9g02101	328	PANTHER	GUANIDINOACETATE N-METHYLTRANSFERASE	29	323	-	-
	Lapu9g02101	328	Gene3D	-	1	107	IPR036770	-
	Lapu9g02101	328	ProSiteProfiles	Arginine and arginine-like N-methyltransferase domain profile.	110	328	IPR026480	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu9g02101	3	96	MAP Kinase Kinase Kinase	AT2G31800	34.043	5.11e-06	46.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu9g02101	K18477		-	gmx:100527621	638.262

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu9g02101	9	35786602	35788814	Lapu9g02101	9	35786602	35788814	ECH