Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02094 ATGTTAACCACCGTCAACAGCGACAATTCCTTCTCCGCTTTCAGCGACTGCAACAGCGACAGATCCGCCGAATTCTCCACACCGTCTTCCGAGAGCCGCCGCCTCATCATCGCCTGCGCCGCCGACAATTCCGACGAATTCCTTCGCCACCTTGTTCTCAACCTCCATTCCTATTCCATTGACGAGCAGAAACAGGCCACCATGGAAATCAGGCTACTCGCCAAGAACAAGCAAGAGAACCGCGTCAGGATCGCAAAAGCCGGCGCGATTAAACCCTTGATTTCACTTTTATCCTCCTCGTCAGACCCTCAGCTTCAGGAGTACGTGGTGACCGCGATTCTCAATCTCTCCCTCTGCGACGAGAACAAAGAGCTCATCAATTCCTCGGGAGCGGTCAAGCCTCTAGTGGTAGCGCTGGAGACCGGGACGCCGACGGCGAAGGAGAACGCGGCGTGCGCGATGCTCCGCCTCTCGCAGACAGAGGAGGACAAGGTTGCGATAGGGAGGGCAGGGGCGATTCCGCCTCTGGTGAAGCTTCTAGAAGGCGGGGGGTTGCGCGGGAAGAAGGACGCGGCGACGGCGCTGTACGCGTTGTGTTCGGCGAAGGAGAACAAGGTGAGGGCGGTGAGGGCGGGGGTTATGAGGGCGCTGGTGGAGCTGATGGCGGACTTGGGGTCGAGCATGGTAGACAAGGCGGTGTACGTGGTGAGCGTGGTGGTTGGGGTGGCGGAGGGGAGGGCGGCGCTGGTGGATGAAGGGGGGATTCCGGTGCTGGTGGAGATAGTGGAGGTGGGGACGCAGAGGCAGAAGGAGATCGCCGTTGGGGTTCTGTTACAGATTTGCGAGGAGAGTTTGGTGTACCGTACTATGGTGTCCCGCGAAGGAGCCATTCCACCCCTCGTTGCTTTCTCACAATCACACTCCCACTCCGATCGCCCCAGGGGCTGA 948 0.596 MLTTVNSDNSFSAFSDCNSDRSAEFSTPSSESRRLIIACAADNSDEFLRHLVLNLHSYSIDEQKQATMEIRLLAKNKQENRVRIAKAGAIKPLISLLSSSSDPQLQEYVVTAILNLSLCDENKELINSSGAVKPLVVALETGTPTAKENAACAMLRLSQTEEDKVAIGRAGAIPPLVKLLEGGGLRGKKDAATALYALCSAKENKVRAVRAGVMRALVELMADLGSSMVDKAVYVVSVVVGVAEGRAALVDEGGIPVLVEIVEVGTQRQKEIAVGVLLQICEESLVYRTMVSREGAIPPLVAFSQSHSHSDRPRG* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02094 315 SMART arm_5 242 282 IPR000225 GO:0005515
Lapu9g02094 315 SMART arm_5 77 118 IPR000225 GO:0005515
Lapu9g02094 315 SMART arm_5 201 241 IPR000225 GO:0005515
Lapu9g02094 315 SMART arm_5 160 200 IPR000225 GO:0005515
Lapu9g02094 315 SMART arm_5 119 159 IPR000225 GO:0005515
Lapu9g02094 315 FunFam U-box domain-containing protein 4 163 314 - -
Lapu9g02094 315 SUPERFAMILY ARM repeat 45 309 IPR016024 -
Lapu9g02094 315 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 88 131 IPR000225 GO:0005515
Lapu9g02094 315 Pfam Armadillo/beta-catenin-like repeat 162 199 IPR000225 GO:0005515
Lapu9g02094 315 Pfam Armadillo/beta-catenin-like repeat 78 117 IPR000225 GO:0005515
Lapu9g02094 315 Pfam Armadillo/beta-catenin-like repeat 120 157 IPR000225 GO:0005515
Lapu9g02094 315 Gene3D - 186 314 IPR011989 -
Lapu9g02094 315 Gene3D - 15 184 IPR011989 -
Lapu9g02094 315 PANTHER U BOX DOMAIN-CONTAINING 47 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02094 Lapu-Chr9 35723996 35725201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02094 26 306 U-box Gene Family AT2G23140 49.110 9.50e-76 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02094 - - gmx:100782449 409.068