Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02092 ATGGATGATCTTTCGTCCAGCCTTCTATGCCAAGAAACCGATACGTGTTTGGAAGAAGGAGGTGAAGAATTAGAATACCAATTGGTTGGATCACGGCATGATTTTGGGGTTTCGGAGGACGAGTATGTGGGGATTTTGGTTGAGCGAGAGATCGTTCTTGGGTTCACGAAGGACGACACTTTGGTGTTTGGGGACTGGGTGAAGCGTGCACGCATGGAAGCAATCAATTGGATTCTCAAAACTAGAGCAACATTGGGTTTTCGCTTCGAAACGGCTTATTTGTCAGTCACATACTTCGATCGATTTCTTTCCAGACGGTCCATTGATAGTGAAAAGCGTTGGGCAATTCGGTTGCTTTCAATTGCATGTCTCTCTCTAGCTGCAAAGATGGAGGAGTGCAATGTGCCGGGGCTATCAGAGTTCAAAATGGATGATTATTCCTTTGAGGGAAGAGTGATTCAGAAAATGGAGCTTTTGGTGCTCAGCACATTGGAATGGAAAATGGGTATCGTCACTCCCTTTGATTTTCTTTCCTATTTCATCACAAAGTTCTGTAAAGAATCCCCATCAAGTCCTACTTTTTCCACGGCCATGCAACTCATGTTTACCACAATGAAAGAGGTCAATTTAATGGATAAAAAACCATCAGTTATTGCAGCGGCTGCTACATTAGCGGCAATGGATCAAAAATTGACGATGGACGCGGTGGAGTTGAAGATGAGTTCAATTCCACAACATAGGCTTCTAGAACCTAAAGATGTATTCCAGTACTACAATCTAATTCAAAGATTACAAGAGGAGGATACCAAAAGAGACACGCACACACCAATTGATGTGACTGACAGCTCTCGAGTTACTTCTTCCGCAGCAATGGCAAAGAGAAGAAGACTCACATTCAGTGATGATGAAGGAAGTAGTCATGGGAAGGGACAGGGCTAG 939 0.4366 MDDLSSSLLCQETDTCLEEGGEELEYQLVGSRHDFGVSEDEYVGILVEREIVLGFTKDDTLVFGDWVKRARMEAINWILKTRATLGFRFETAYLSVTYFDRFLSRRSIDSEKRWAIRLLSIACLSLAAKMEECNVPGLSEFKMDDYSFEGRVIQKMELLVLSTLEWKMGIVTPFDFLSYFITKFCKESPSSPTFSTAMQLMFTTMKEVNLMDKKPSVIAAAATLAAMDQKLTMDAVELKMSSIPQHRLLEPKDVFQYYNLIQRLQEEDTKRDTHTPIDVTDSSRVTSSAAMAKRRRLTFSDDEGSSHGKGQG* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02092 312 CDD CYCLIN_AtCycD-like_rpt1 70 166 - -
Lapu9g02092 312 FunFam Cyclin-D5-1 66 169 - -
Lapu9g02092 312 SUPERFAMILY Cyclin-like 36 168 IPR036915 -
Lapu9g02092 312 ProSitePatterns Cyclins signature. 71 102 IPR006671 -
Lapu9g02092 312 Gene3D - 164 275 - -
Lapu9g02092 312 Pfam Cyclin, N-terminal domain 69 168 IPR006671 -
Lapu9g02092 312 SMART cyclin_7 76 162 IPR013763 -
Lapu9g02092 312 SMART cyclin_7 175 263 IPR013763 -
Lapu9g02092 312 PANTHER CYCLINS 45 245 IPR039361 -
Lapu9g02092 312 SUPERFAMILY Cyclin-like 153 243 IPR036915 -
Lapu9g02092 312 MobiDBLite consensus disorder prediction 268 312 - -
Lapu9g02092 312 SMART Cyclin_C_2 171 290 IPR004367 -
Lapu9g02092 312 Gene3D - 64 163 - -
Lapu9g02092 312 Pfam Cyclin, C-terminal domain 171 270 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02092 Lapu-Chr9 35699376 35701637 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02092 8 243 Core Cell Cycle Gene Families AT4G37630 36.546 2.04e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02092 K18811 - gmx:100780266 531.561