Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02091 ATGGCTCCAGGTGACGATGCACAGATCGATGCCCTTCTCTGCGAAGAGCCTGACACCTTCGACGAAGATTTGGATGCCAACGGCGGTGAGTGTGAGATCAACAAAGATGACCCATCTAGGAGAAAATTGCAATCTTTGCCTTTGCCTTTGCTTGAGAATGATCTGTTGTGGGAAGATGAAGAGCTTGTGTCTTTAATCTCGAAAGAGGGAGAGACCCATTCGTGTTCTCTTAGTGCCATTGCTGATGGCCCCTTAGAAGGGTCTCGTGTGGAGGCTGTGAACTGGATTGCAAAAGTTTGTGGACATTATGGGTTTTCTGCTTTGACCACTGTTCTTGCCGTCAACTACTTTGATCGGTTCATCCCAAGTTTGAGGATTCACTGGGACAAGCCGTGGATGACACAGCTCATTGCTGTTGCTTGTTTGTCCCTTGCTGCAAAAAGGGAAGAGACCTATGTGCCGCTTCTTTTGGACCTTCAAGTGGAGGGATCAAAGTTTGTGTTTGAGGCGCAGACTATTCAGAGAATGGAGCTGCTGGTGTTGTCAACCCTTAAATGGAAGATGCATCCGGTAACTCCGATTTCTTTCTTCGAACACGTTGTCAGAAGGCTCGGTTTGAAGAGTCGCTTGCATTGGGAGTTTCTACGGCATTGTGAGCGGGTTCTTCTCAATGTCACTGCGGATTCAAGGACAATGAGTTATCTTCCTTCTACATTGGCTGCTGCTACCATGATCCATGTTATTAAAGAGACTGAATCATTTAACGCTACAAAGTACATTGATCGGCTTCTGGGTTTACTAAAGATTAGCCAGGAACAAGTGAACCAGTGTTACAAGCTCATGCAGAAAATATTAGGCCGCTACGAAGGCATTTACAGTCTTCACCAGAAACGCAAGCGTCTATCTGAACCAAGTAGCCCAGATGGTATCCTTGATTCACCTTTCAGTTTTGATAGCTCAAATGATTCGTGGGAGTTGTCATCATCAGTCTCACTGGAGCCGCTGTTTAAGAGCAGAAGAACTTAG 1026 0.46 MAPGDDAQIDALLCEEPDTFDEDLDANGGECEINKDDPSRRKLQSLPLPLLENDLLWEDEELVSLISKEGETHSCSLSAIADGPLEGSRVEAVNWIAKVCGHYGFSALTTVLAVNYFDRFIPSLRIHWDKPWMTQLIAVACLSLAAKREETYVPLLLDLQVEGSKFVFEAQTIQRMELLVLSTLKWKMHPVTPISFFEHVVRRLGLKSRLHWEFLRHCERVLLNVTADSRTMSYLPSTLAAATMIHVIKETESFNATKYIDRLLGLLKISQEQVNQCYKLMQKILGRYEGIYSLHQKRKRLSEPSSPDGILDSPFSFDSSNDSWELSSSVSLEPLFKSRRT* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02091 341 CDD CYCLIN_AtCycD-like_rpt2 191 281 - -
Lapu9g02091 341 Pfam Cyclin, N-terminal domain 88 188 IPR006671 -
Lapu9g02091 341 Gene3D - 190 279 - -
Lapu9g02091 341 SMART cyclin_7 94 182 IPR013763 -
Lapu9g02091 341 Pfam Cyclin, C-terminal domain 191 288 IPR004367 -
Lapu9g02091 341 FunFam D6-type cyclin 63 189 - -
Lapu9g02091 341 Gene3D - 87 189 - -
Lapu9g02091 341 SUPERFAMILY Cyclin-like 57 189 IPR036915 -
Lapu9g02091 341 FunFam CYCLIN D32 190 279 - -
Lapu9g02091 341 CDD CYCLIN_AtCycD-like_rpt1 89 186 - -
Lapu9g02091 341 SMART Cyclin_C_2 191 304 IPR004367 -
Lapu9g02091 341 SUPERFAMILY Cyclin-like 173 287 IPR036915 -
Lapu9g02091 341 PANTHER CYCLINS 80 286 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02091 Lapu-Chr9 35692788 35694055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02091 9 341 Core Cell Cycle Gene Families AT5G67260 49.123 1.49e-99 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02091 K14505 - gmx:100785030 497.278