Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02089 ATGGTGGTGATCTATATGGCTCCTACCCCTAAGCCTCCTCCGATCAACATTGAACCGGAAAATTGCCCTGAAGCGGTGACGCAATGGTACTACCTCACATCACTACCAAATAACAGGAGACAATGTACATTACGCAGGGACCTCTCTTTACAAGCCAAGAAACATCTTCTTTATCTGGGTTGGAAATTTTGGTATGTTGACAAGAAAGAAAAGTGGGAATTGCGTTACACATCACCCGTCAGTGGCAAGAATTACATTTCTCTCGCAAGGGCATGTAAAGGTTGCATAGAAGAAGGAGGTTGCAAAGGAAACCCTCAAAATCTTGGAGAAAACAACGTTGTTCGTCTCCAATACCCTATGTCTTCTCAGCCAAAAAAGGAGACAAGAGAATCCAGGAAGAGAACCAGTGTGTACAACAAAAGGCTAAAGGATGATCACGATGATGAGTTAAAAGATGGCTTTAGTTATGTGAATGGTAGAAGAGGTAAGGTTGCGCGGTCAATCAAAACAATGAGGCAAGAGGGTGAGGCACCAGGTTCTATGTCTTCACAACACCATAGTGGAACCCTTATCCCGTGGTTGATAGAAAACGGTGTTGTGCGTTTAGATTCTGTGGTATTCTGCCGTGGTGCAAATAACGTGGTTAAGAAAGGGAAGCTATTGTGTAGTGGCATAGCTTGTGATTGCTGTGGCATGTTTTTTTCTCCCACTCGCTTTGAGGATCATGCTGGGTGTCTCGGGCACAGACCAAATTCTAGCATTTTCTTGGAAGATGGAAGGTCATTGTTAGATTGTCAAAAACAAGTCCTGAGTTCTCAGCAAAACGGGTTTGCGAAAGAACAGGAAATGGATGATTTTGATTATCGAAATGATAGCATTTGTGCCGTTTGTGGTTACGGTGGTGAACTATTGCTGTGTGATAGATGCCCCTCTTCGTTCCACCTCAGGCAACCCAGATGCACAGATGACTGTGCTAATGATGTGGGTGTTAACACTGTTTTAGTTTGTCATCAGTGCGAGGGAAGATACCATACTGGGTGCTTAAAAGCTCCAGCGCCAGCATATACCAAGATGGCAAAGGAAGAATACCATGCCGGTGGGAATTGGTTCTGCAGTAGAGACTGTGAGAAGATATTTTTCAGTCTGCAGGAGCTTCTGGGAAAAGTCATTAATGTTGCTGCAGACAATCTTACTTGGACGCTGTTGAAGGCAGTCGAAAGGGATAAGAGTGGAGAAGATTATCTTACTTTGGATGGAGTTGAAGGTTTGAATCAAAACGAAAGTAAGCTGAGTGCAGCTCTTGATGTATTGCGTGGGAGTTTTGACCCAGTTATTGATGCTTTTTCTGGTAGAGATGTGATAGCTGACGTTGTTTTCAGCAGAGGGTCAGAAATAGATCGCTTGAACTTTCGTGGCTTTTATACTGTGGTTCTGGAGAGGGATAAGGAGGTGGTTTCTGTTGCTACTGTGAGGATTTTTGGCAAGAGGGTTGCAGAAATTCCCTTTGTGGCTACTAGGATGCAGTATAGAAGACAAGGAATGTGTGGCATCTTGATGTATGAGATTGAGAAACAGTTAACTTACTTGGGAGTGGAGAGGTTGGTTCTGCCTTCCTCGTGCAGTGTGATAGACACTTGGACAAAATCATTTGATTTTGTGAAGATGAAACCTTCAGATAAGTCTCAGCTAGTTGATCATGTTTTTCTGAACTTCGAGGGTACCATCATATGCCACAAATCTTTGGTGCAACAAACTTATGTATGA 1764 0.4337 MVVIYMAPTPKPPPINIEPENCPEAVTQWYYLTSLPNNRRQCTLRRDLSLQAKKHLLYLGWKFWYVDKKEKWELRYTSPVSGKNYISLARACKGCIEEGGCKGNPQNLGENNVVRLQYPMSSQPKKETRESRKRTSVYNKRLKDDHDDELKDGFSYVNGRRGKVARSIKTMRQEGEAPGSMSSQHHSGTLIPWLIENGVVRLDSVVFCRGANNVVKKGKLLCSGIACDCCGMFFSPTRFEDHAGCLGHRPNSSIFLEDGRSLLDCQKQVLSSQQNGFAKEQEMDDFDYRNDSICAVCGYGGELLLCDRCPSSFHLRQPRCTDDCANDVGVNTVLVCHQCEGRYHTGCLKAPAPAYTKMAKEEYHAGGNWFCSRDCEKIFFSLQELLGKVINVAADNLTWTLLKAVERDKSGEDYLTLDGVEGLNQNESKLSAALDVLRGSFDPVIDAFSGRDVIADVVFSRGSEIDRLNFRGFYTVVLERDKEVVSVATVRIFGKRVAEIPFVATRMQYRRQGMCGILMYEIEKQLTYLGVERLVLPSSCSVIDTWTKSFDFVKMKPSDKSQLVDHVFLNFEGTIICHKSLVQQTYV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02089 587 PANTHER PHD FINGER PROTEIN 12 24 584 IPR042163 GO:0003714|GO:0045892
Lapu9g02089 587 MobiDBLite consensus disorder prediction 118 138 - -
Lapu9g02089 587 CDD NAT_SF 476 536 - -
Lapu9g02089 587 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 323 378 IPR013083 -
Lapu9g02089 587 Gene3D - 453 567 - -
Lapu9g02089 587 SUPERFAMILY FYVE/PHD zinc finger 280 315 IPR011011 -
Lapu9g02089 587 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 322 IPR013083 -
Lapu9g02089 587 Pfam Tify domain binding domain 218 268 IPR032308 -
Lapu9g02089 587 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 420 574 IPR000182 GO:0016747
Lapu9g02089 587 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 465 542 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02089 Lapu-Chr9 35670013 35671845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02089 105 529 PHD Transcription Factor Family AT5G58610 35.982 4.45e-77 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02089 - - vra:106760454 864.759