Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02065 ATGAAGGGTATGGATGAGAGTAACACCGATGATGGAAACAATAACAACTGGTTGGGGTTCTCTCTGTCACCCCACATGAAAATGGAGGTTACTTCAGCAGCCACTGTTCCCAACCCCACTGTTCCGACAGCCTTCTACCTGTCCTCTCCTCACATTTCCAGCTCAGGAATCTGTTACGGAGTCGGGGGAAATGGTAACTTTCATTCTCCTCTTACCGTTATGCCTATCAAGTCAGATGGGTCACTTTGTATCTTGGAAGCTCTCAATAGATCACAATCGCAAGTAATGGTGCCAAATTCTACTCCTAAATTGGAGGACTTCCTCGGTGGTGCAACTATGGGAACTCACGAATATGGGAGCCACGAGAGAGGGGCAAATGCAATGGCTCTGAGCCTGGACAGCATGTATTATAGCACCCAAAATGCTCAGGTCCAACCCAGCAGAGACATTCTTTCAGAACCCTTCAGGCAACAAGGGCATATGAACGTCCAAACACACCCTTATTACCCAGGACTTGGTTGCCCTGGGATGTATCAAGCACCGTTGGAGGATGAAGCAGCAAAGGAAGCGCACGCTTCAGTTTGCAGCTCCCTAATGCCTCAAATGACAGAAGATGGTTTGAAAAACTGGGTGGCCTCAAGGGAATATTCAACTCATCAGCAGGTTTTGGAGCAGCAAATGAACTGTGGAATGGGGAATGAGAGAAGTGACATCTCTCTTGGAACTGTGGGGTGTGGCGAGTTACAGTCACTTAGTTTATCGATGAGTCCTGGTTCTCAGTCTAGTTGTGTCACTGCACCTTCTGGGACAGATTCTGTAGCTGTTGATGCTAAGAAGAGAGCGCATGCAAAGTTGGGTCAAAAGCAACCCGTGCATAGGAAATCTATTGACACATTTGGGCAGAGAACCTCTCAGTATAGAGGTGTCACAAGGCACAGATGGACTGGTAGGTATGAAGCACATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAGACTAGGAAAGGAAGACAAGTATATTTGGGTGGTTACGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTCGCGGCCCTTAAGTACTGGGGACCTTCGACGCATATAAACTTTTCGATTGAAAATTACCAAGTTGAACTTGAAGAGATGAAGAACATGAGCAGGCAAGAATACGTTGCACACTTAAGAAGAAAAAGCAGTGGATTTTCAAGGGGTGCTTCAATATACCGAGGGGTCACAAGACACCACCAACATGGAAGATGGCAGGCAAGGATAGGAAGAGTTGCTGGAAACAAGGACCTATACCTTGGGACGTTCAGCACTCAGGAGGAAGCAGCAGAAGCATACGATGTAGCCGCAATCAAATTCCGCGGCGCAAATGCAGTCACAAACTTTGACATTTCAAGATACGATGTCGAGAGAATCATGGCCAGTATTAATCTTCTCGCTGGGGAGCTTGCAAGGAGAAATAAAGACAATGATCCAAGAAACGAGGCCAGTGAGTACAATATCAAAAACAATAACAAGGATGTAGTGACAAGTCAGAGCAATGAAGAAATAGTTCAAGGTAGAAACAACAATGAAAACGATTCAGAGTGGAAAATGGTTTTGTTTAATCACCCTTCACACCAACAACAGTCTAATGACAGTGTGCAGAAAATAATGAACTGCGGAAATTATAGAAACAGTGCATTCTCTGGGGCCCTACAAGATCTCATTGGGATTGATTCGGTGGACGAGTGTAGCAAAATTGGGACTCATTTTTCTAACGCGTCCTCGCTGGTGACTAGTTTAAGCAGCTCAAGAGAGGCTAGTCCTGAGAAAACTGGTCCCTCGCATCTGTTTCCAAAGCCCCCAATGGAAACAAAGATTGTGAACCCCATTAGTACTAGTGTTACATCTTGGTTACCCTCACCAACGGTTCAAATGAGGCCACCGCCTGCTATTTCTTTGTCTCACTTGCCAGTTTTTGCTGCTTGGACTAATACTTAA 1989 0.4555 MKGMDESNTDDGNNNNWLGFSLSPHMKMEVTSAATVPNPTVPTAFYLSSPHISSSGICYGVGGNGNFHSPLTVMPIKSDGSLCILEALNRSQSQVMVPNSTPKLEDFLGGATMGTHEYGSHERGANAMALSLDSMYYSTQNAQVQPSRDILSEPFRQQGHMNVQTHPYYPGLGCPGMYQAPLEDEAAKEAHASVCSSLMPQMTEDGLKNWVASREYSTHQQVLEQQMNCGMGNERSDISLGTVGCGELQSLSLSMSPGSQSSCVTAPSGTDSVAVDAKKRAHAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYQVELEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELARRNKDNDPRNEASEYNIKNNNKDVVTSQSNEEIVQGRNNNENDSEWKMVLFNHPSHQQQSNDSVQKIMNCGNYRNSAFSGALQDLIGIDSVDECSKIGTHFSNASSLVTSLSSSREASPEKTGPSHLFPKPPMETKIVNPISTSVTSWLPSPTVQMRPPPAISLSHLPVFAAWTNT* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02065 662 MobiDBLite consensus disorder prediction 489 516 - -
Lapu9g02065 662 SMART rav1_2 305 377 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 SMART rav1_2 407 471 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 FunFam AP2-like ethylene-responsive transcription factor ANT 304 373 - -
Lapu9g02065 662 CDD AP2 304 370 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 98 542 - -
Lapu9g02065 662 Pfam AP2 domain 305 363 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 Pfam AP2 domain 407 457 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 FunFam AP2-like ethylene-responsive transcription factor 406 467 - -
Lapu9g02065 662 PRINTS Ethylene responsive element binding protein signature 447 467 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 PRINTS Ethylene responsive element binding protein signature 306 317 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 ProSiteProfiles AP2/ERF domain profile. 407 465 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 Gene3D AP2/ERF domain 304 373 IPR036955 GO:0003700|GO:0006355
Lapu9g02065 662 Gene3D AP2/ERF domain 407 467 IPR036955 GO:0003700|GO:0006355
Lapu9g02065 662 SUPERFAMILY DNA-binding domain 406 467 IPR016177 GO:0003677
Lapu9g02065 662 MobiDBLite consensus disorder prediction 499 516 - -
Lapu9g02065 662 MobiDBLite consensus disorder prediction 598 619 - -
Lapu9g02065 662 CDD AP2 406 467 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 ProSiteProfiles AP2/ERF domain profile. 305 371 IPR001471 GO:0003700|GO:0006355
Lapu9g02065 662 SUPERFAMILY DNA-binding domain 304 373 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02065 Lapu-Chr9 35437758 35441975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02065 251 487 AP2-EREBP Transcription Factor Family AT1G72570 72.314 8.76e-121 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lapu9g02065 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02065 K09285 - gmx:100787223 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02065 9 35437758 35441975 Lapu9g02065 9 35437758 35441975 ECH
Lapu8g00803 8 26144961 26149176 Lapu9g02065 9 35437758 35441975 PCT