Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02045 ATGGGTATCTGCATATCCTCTGAATCTTCAGCGATTCATGGAGCGCCAGAAGAAGCTCGTGATGAAAATGTTTTAGTGTTTGAAGCAACCAAAGTTCTAAGGGGACTTTCCTCTGCTTACTCTAAACAAGGTAGCAAAGGACTCAACCAAGATGCTGCTACCCTTTGTCAGGGTTATGGGACGGCAAACGCAGCATTTTGTGGTGTTTTTGATGGGCATGGAAGGAATGGTCACGTAGTGAGCAAAATAGTAAACAGCCGTTTGAGTTCACTCATACTGAACCAAAAGAAAGTGCATGCAAAGATTGCAAAAAAGAACATCATAAACCATGAGGACACAGTTGAAGACGACTCATCGGTTCTACTAAACAAGAATTTTCAAGAGTGGAAAGAAGCTATTCTTGATGGTTTCAGGGTGATGGACAAGGAGGTGAAGCTACAAGAGAATCTGGACTGCTCTTGCAGTGGAACTACAGCTGTGGTTGTCATAAGACAGGGTGAAGATCTTGTCATAGCTAACCTTGGTGACTCGAGAGCAATCTTGGGGACAATCTCGGACGGTGAAATCATGCCGATTCAACTGACAACGGATATGAAACCTGGATTACCTTGCGAAGCAGAACGAATAAAAAGTTGCAATGGCCGTGTATTTGCCCTGAAGGAAGAACCGCACATCCAGCGAGTGTGGTTACCCAACGAGAACTCCCCAGGTCTAGCCATGTCTCGGGCTTTTGGAGATTTCATGCTCAAAGACCACGGTATCATTGCCATCCCAGATATTTCGCATCGCACTCTAACATCCAGCGACCAATTTATTGTTCTCGCAAGCGATGGGGTGTGGGATGTACTAAGCAACAAGGAGGTTTGCTCAATTGTGTGGGCAGCAGACACTGAAAAAGAAGCAGCAAGGGCTGTAGTGGAAGCAGCAGCAGTGGCATGGAAAAACAAGTATCCTTCTTCTAAGCTAGATGACTGCACTGTGGTTTGCCTCTTCCTCCAGAAGAAACCACAGTTCCTACCCGTCAAAAGTGGAAATCCCTGA 1041 0.4573 MGICISSESSAIHGAPEEARDENVLVFEATKVLRGLSSAYSKQGSKGLNQDAATLCQGYGTANAAFCGVFDGHGRNGHVVSKIVNSRLSSLILNQKKVHAKIAKKNIINHEDTVEDDSSVLLNKNFQEWKEAILDGFRVMDKEVKLQENLDCSCSGTTAVVVIRQGEDLVIANLGDSRAILGTISDGEIMPIQLTTDMKPGLPCEAERIKSCNGRVFALKEEPHIQRVWLPNENSPGLAMSRAFGDFMLKDHGIIAIPDISHRTLTSSDQFIVLASDGVWDVLSNKEVCSIVWAADTEKEAARAVVEAAAVAWKNKYPSSKLDDCTVVCLFLQKKPQFLPVKSGNP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02045 346 Gene3D - 25 335 IPR036457 -
Lapu9g02045 346 Pfam Protein phosphatase 2C 61 309 IPR001932 -
Lapu9g02045 346 CDD PP2Cc 37 332 IPR001932 -
Lapu9g02045 346 PANTHER PROTEIN PHOSPHATASE 37 330 IPR015655 GO:0004722|GO:0006470
Lapu9g02045 346 SMART PP2C_4 26 330 IPR001932 -
Lapu9g02045 346 SUPERFAMILY PP2C-like 34 333 IPR036457 -
Lapu9g02045 346 ProSiteProfiles PPM-type phosphatase domain profile. 36 332 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02045 Lapu-Chr9 35206335 35207964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02045 1 337 PP2C-type Phosphatase Gene Family AT5G26010 52.299 1.30e-108 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02045 - - gmx:100795893 576.244