Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02037 ATGGGAATAGCCAGAAAATGTTCTTATTGTGGCACCTTAGGTCACAATTCAAGGACTTGTAAGAGTCCTCTCGCTCATGGACACCTGAAGCTCTTTGGAGTGCAACTTCACATTTCTTCTTCTTCTTCTTCATCATCCTCTTCTATTTCCTTTTCCTCACCTTCATCTTCTGCCATGAAACCAAGTTCCAGCTCCGATTACTTCTTCTCTTCCTCTCCTTCCCTGCTTCATGCTAATGAAAATTCAGATGCTTACTTACTCAGTGCCAATACCCTCCTCTCAAACATTCAACCCTCAAAAAAAGGTGTGGCATGGACAGAGGAAGAGCACAGGGTATTTCTTGTAGGGCTTCAGAAGCTGGGGAAGGGAAACTGGAGAGGCATATCTAAAAGTTTTGTGAAAACAAGAACACCTGTGCAAGTGGCCAGCCATGCACAAAAGTATTTTCTCCGTCAATCTCACAAAACAAAACACCCTTTCTCTTCAACTTCAACCTCATCTTCATCTTCATCTTCAACTAATTCCACTCTTCAGATGGCAGCACCAGATTTAGAACTCAAACTTGCAACTCCCACGCCATTGCAGCTATAG 591 0.4315 MGIARKCSYCGTLGHNSRTCKSPLAHGHLKLFGVQLHISSSSSSSSSSISFSSPSSSAMKPSSSSDYFFSSSPSLLHANENSDAYLLSANTLLSNIQPSKKGVAWTEEEHRVFLVGLQKLGKGNWRGISKSFVKTRTPVQVASHAQKYFLRQSHKTKHPFSSTSTSSSSSSSTNSTLQMAAPDLELKLATPTPLQL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02037 196 FunFam transcription factor MYB1R1 103 154 - -
Lapu9g02037 196 Pfam Myb-like DNA-binding domain 104 149 IPR001005 -
Lapu9g02037 196 MobiDBLite consensus disorder prediction 153 180 - -
Lapu9g02037 196 SUPERFAMILY Homeodomain-like 97 153 IPR009057 -
Lapu9g02037 196 PANTHER TRANSCRIPTION FACTOR KUA1 5 159 - -
Lapu9g02037 196 Gene3D - 105 154 - -
Lapu9g02037 196 ProSiteProfiles Myb-like domain profile. 97 149 IPR001005 -
Lapu9g02037 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 153 IPR017930 -
Lapu9g02037 196 CDD SANT 104 149 IPR001005 -
Lapu9g02037 196 MobiDBLite consensus disorder prediction 153 184 - -
Lapu9g02037 196 NCBIfam myb-like DNA-binding domain, SHAQKYF class 100 152 IPR006447 GO:0003677
Lapu9g02037 196 SMART sant 101 151 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02037 Lapu-Chr9 35148500 35150046 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu9g02037 Myb_DNA-binding 3.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02037 - - pvu:PHAVU_009G077300g 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02037 9 35148500 35150046 Lapu9g02037 9 35148500 35150046 ECH