Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02029 ATGAAGGGAGGTATAGTGAAAGAGGAAGAAACAATGGCATTTGTAGCTGCTGCTGCTTCTTCTTCATCTTCATCCTCCACTTCCAACCTCTCCCCGCAACCCATGGAAGGGTTGCACGATGTGGGTCCCCCTCCGTTTCTCACCAAAACCTTCGACGTGGTGGAAGACCCTTCCACCAACGACATCGTTTCGTGGAGCAGAGCGCGCAACAGTTTCGTCGTTTGGGACTCTCACAAGTTCTCCACCACTATCTTGCCTCGTTACTTTAAGCACAACAATTTCTCCAGCTTCGTACGACAACTCAACACCTATGGTTTTAGAAAAGTTGATCCTGACAAATGGGAATTTGCGAACGAAGGGTTTCTGGCGGGACAGAGGCACTTGTTGAAGACGATCAAGAGAAGGAGGCACGTGACACAGACACAGTCACACGAGGGAGGGAGTGGAGCTTGTGTTGAATTGGGGGAGTTTGGATTGGAAGGTGAGATGGAGAGGTTGAGGAGAGATAGGACAGTTCTAATGGCTGAAATTGTGAGGTTGAGGCAGCAACAGCACAATTCAAGGGAGCAATTGTTGTCTATGGAGGCCAGATTGCAAGTCAGTGAGAAGAAGCATCAGCAGATGATGACTTTTCTTGCTAAGGCACTCCACAATCAGACTTTTATTCAGAAGTTCCTTAATAGGAACGGTCAGAAGATAGAATTGCAAGGTGCTAGAAGAAAGAGAAGGCTAACTGCTTCCCCAAGTGTGGAGAATTTGCAGCAAGATCCTGTGACTGATGTAGCAGTGCCAGTTGAAGAGGAATCGACTACTATTGAGTCGCACATGGAGTCTCTTCTCTCAGCTGTCTGTGACGATGATCCATTAGAATCAAGCACTGAATTCGAAGACCCAATTTTAAGTTCAGTTCCTACTACTGGTGGTGGGAGTAATCTGGGGGTGGTAAGTGATGCAATCTGGGAGGACTTACTGAACCAAGACTTGGTTGCTGGGAACCCCGAGGAGGAAGTTGCGATTGATGATTTTTCACAAGTTGATGTTCCTGTGGAGGATTTGGTTGCAGAGCCTGATGAGTGGAGTGAGGATTTGCAGAACCTTGTGGATCATATGGGTTATCTTGTGTCCAAACCCTAG 1134 0.4735 MKGGIVKEEETMAFVAAAASSSSSSSTSNLSPQPMEGLHDVGPPPFLTKTFDVVEDPSTNDIVSWSRARNSFVVWDSHKFSTTILPRYFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEGFLAGQRHLLKTIKRRRHVTQTQSHEGGSGACVELGEFGLEGEMERLRRDRTVLMAEIVRLRQQQHNSREQLLSMEARLQVSEKKHQQMMTFLAKALHNQTFIQKFLNRNGQKIELQGARRKRRLTASPSVENLQQDPVTDVAVPVEEESTTIESHMESLLSAVCDDDPLESSTEFEDPILSSVPTTGGGSNLGVVSDAIWEDLLNQDLVAGNPEEEVAIDDFSQVDVPVEDLVAEPDEWSEDLQNLVDHMGYLVSKP* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02029 377 MobiDBLite consensus disorder prediction 17 37 - -
Lapu9g02029 377 FunFam Heat shock transcription factor 1 39 136 - -
Lapu9g02029 377 Pfam HSF-type DNA-binding 46 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu9g02029 377 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 32 265 IPR027725 -
Lapu9g02029 377 SUPERFAMILY "Winged helix" DNA-binding domain 42 135 IPR036390 -
Lapu9g02029 377 PRINTS Heat shock factor (HSF) domain signature 97 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu9g02029 377 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu9g02029 377 PRINTS Heat shock factor (HSF) domain signature 46 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu9g02029 377 Gene3D - 39 136 IPR036388 -
Lapu9g02029 377 MobiDBLite consensus disorder prediction 17 34 - -
Lapu9g02029 377 ProSitePatterns HSF-type DNA-binding domain signature. 85 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu9g02029 377 SMART hsfneu3 42 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu9g02029 377 Coils Coil 163 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02029 Lapu-Chr9 35079446 35080782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02029 32 377 HSF AT2G26150 51.714 1.66e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lapu9g02029 HSF_DNA-bind 1.9e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02029 K09419 - gmx:100794605 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02029 9 35079446 35080782 Lapu9g02029 9 35079446 35080782 ECH