Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02019 ATGTCTCTTCAATACCCAGGTGCCGCCCCACCGCAGAACGTTACAATGGTAGCTGTTGACAAAGACAAGAACAGTGCCCACGCTTTCCGTTGGGCCGTTAATCATCTTGACAACCCCGTCATCATTGCCGTCCATGTCAAGCACAAAAACTTTTCTCATCATGTCACCAATGTGTTTCCACCCGATGAAGAGGACGTGGTCAATATCTTCAATTCCTTACGTGGAATGTGTAATCGCAAAGCTGTCACGATGAAAGAAGCCGTAGTCGATGATGCCGATGTTGTGAGAGGACTTCTAGAGTTTGCGAACAGAAATCTCATACATACTATTGTGGTCGGTGCTTCCGCCAAAAACCCTTTGACAAGTCTCAAAAAATTTAAACCCTATCAGTATCAGGATATACCAACAACCATGATCAAATCAGCTCCAGATTACTGCTCTGTATACATAATTTCGAAATTGAAGATTGTGTCTGCTCGATCAGCGGTACGGTCATTGGCTAAAAGTTTTACCAAACAAGTTCCTGTGCCAGCAAGTCCACCTAGTGAATCAGAAGGTGGATCATTAAGGGGACAACCACCTAGAAGTAGGAGCAATTACGAAGGAGCAGCAGAACCAGTGAGAATAATACAGGCAAGAGAAAGACCGAAGAGTGCGGGAAGTAGTATGTTAATAGAAAACATTGAACTACCCACTCGTCCACGACATTGGTCAATGGATGAAAGAGAAATCTCTGGGCTTGGGGCAATGGATTTGAATATACTTGATTCTGGTATATCAGATTCCCTCGGGATGTCATCATCTCCTCAATCCTCAAAAGAACTTGAAGCAGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATATCAGCCAAAAACCAGGCGGACCAGATTCGTCAATGGAAACTGGAAGAAGATCGCAAGGTTGAGGTAGTTAGGTTGTCTCAAGAGGCTGCTCTTGCAATGGCAGAAAAGGAGAAGGCTAGAGCCAAAGCTGCAATGGAAGCAGCTGAGGAGTCTAGGAGGAGGGCTGAACAGGAAGCACAGAGAAGAAAGGATGCAGAGATGAAAGCCATGGCAGAGGTAGAAGAGAAAGAACGAGCGTTATCTTCGTTGGCTCAAAATGATATCCGGTATAGAAAATACACCATAGAGGAGATTGAAATAGCCACAGAAAAGTTCTCCCCATCAAACAAAATTGGTGAAGGTGGATATGGACCTGTGTATAAAGGCCACCTTGATCACACCCCGGTTGCAATCAAAATTTTAAGGCCCGATGCTTCTCAGGGCATGAAGCAGTTCAACCAAGAGATTGAGGTACTAAGCTGTATTAGACATCCACATATGGTCCTACTCCTTGGTGCATGTCCTGAGCATGGATGCTTAGTGTATGAATTCCTGGATAATGGCAGCTTAGAAGACAGATTGTACCGGAAAAACAACAGCAGGCCAATTTCATGGAAGAAACGGTTCCAAATATCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAAACAAGCCAGAACCTATCGTGCACCGAGACCTCAAACCAGCCAACATTCTCGTGAACAGGAATTACGTGAGTAAAATCAGTGATGTTGGTCTTGCACGTTTAGTCCCTCCTTCTGTAGCTGATACTGTGACACAATATTACATGACTTCGGCTGCTGGAACCTTCTGTTACATTGATCCTGAGTATCAACAAACGGGAATGCTAACAACAAAGTCAGATATATATTCTCTGGGGATAATGCTACTTCAGATAATCACAGGCAAGCCCCCCATGGGCCTTGCTCACCAAGTTAGGAAGGCAATTGAAAAGGGGAGGTTTGAAGAAGTGCTCGACCCTGTGATCACAGATTGGCCAGTTGAAGAGGCTTTATCATATGCCAAATTGGCATTGAAGTGTGCCCAACTCAGCAAGAAGGACAGACCAAATCTTGCAAAGGAGGTGTTGCCTGAGCTTAACAGATTAAGCGAACTTGAATTGACTCCACAGAATGATCGAGTTTCTCTTAACAGTGATGATGTGTTCTACAGCTATGCCTCACGTCCTCCCACACCTCCATGA 2112 0.4465 MSLQYPGAAPPQNVTMVAVDKDKNSAHAFRWAVNHLDNPVIIAVHVKHKNFSHHVTNVFPPDEEDVVNIFNSLRGMCNRKAVTMKEAVVDDADVVRGLLEFANRNLIHTIVVGASAKNPLTSLKKFKPYQYQDIPTTMIKSAPDYCSVYIISKLKIVSARSAVRSLAKSFTKQVPVPASPPSESEGGSLRGQPPRSRSNYEGAAEPVRIIQARERPKSAGSSMLIENIELPTRPRHWSMDEREISGLGAMDLNILDSGISDSLGMSSSPQSSKELEAEMKRLRLELKQTMDMYSSACKQAISAKNQADQIRQWKLEEDRKVEVVRLSQEAALAMAEKEKARAKAAMEAAEESRRRAEQEAQRRKDAEMKAMAEVEEKERALSSLAQNDIRYRKYTIEEIEIATEKFSPSNKIGEGGYGPVYKGHLDHTPVAIKILRPDASQGMKQFNQEIEVLSCIRHPHMVLLLGACPEHGCLVYEFLDNGSLEDRLYRKNNSRPISWKKRFQISAEIATALLFLHQNKPEPIVHRDLKPANILVNRNYVSKISDVGLARLVPPSVADTVTQYYMTSAAGTFCYIDPEYQQTGMLTTKSDIYSLGIMLLQIITGKPPMGLAHQVRKAIEKGRFEEVLDPVITDWPVEEALSYAKLALKCAQLSKKDRPNLAKEVLPELNRLSELELTPQNDRVSLNSDDVFYSYASRPPTPP* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02019 703 Coils Coil 272 292 - -
Lapu9g02019 703 Pfam Protein kinase domain 409 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02019 703 SMART serkin_6 406 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02019 703 Gene3D Transferase(Phosphotransferase) domain 1 479 691 - -
Lapu9g02019 703 FunFam U-box domain-containing protein 51 479 678 - -
Lapu9g02019 703 ProSiteProfiles Protein kinase domain profile. 406 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02019 703 Gene3D Phosphorylase Kinase; domain 1 384 478 - -
Lapu9g02019 703 CDD STK_N 14 153 - -
Lapu9g02019 703 Gene3D HUPs 15 126 IPR014729 -
Lapu9g02019 703 Coils Coil 323 387 - -
Lapu9g02019 703 SUPERFAMILY Protein kinase-like (PK-like) 386 662 IPR011009 -
Lapu9g02019 703 PANTHER OS02G0152300 PROTEIN 15 678 - -
Lapu9g02019 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Lapu9g02019 703 Pfam Universal stress protein family 16 121 IPR006016 -
Lapu9g02019 703 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 478 - -
Lapu9g02019 703 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 122 - -
Lapu9g02019 703 MobiDBLite consensus disorder prediction 170 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02019 Lapu-Chr9 34998698 35002291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02019 84 675 Receptor kinase-like Gene Family AT5G12000 57.488 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lapu9g02019 Pkinase 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02019 - - gmx:100798861 1089.72