Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02016 ATGGAGGAGATGTCAGCCACGGTTGCAGTGCCATTGAGAGTAGGTAATTCAGTGTGTGATAAGCCAACCATTACTACCCACATGGATGTGTCCAGAATTAAGCTGATGGCAGATACAGGGTTGTTATCTAATTCTATAACTAAGGTTTCTACTGATACTTTTATTGGTTCGGATGAGGATCATGACGGTGATTGTCTTGAGGAGGAAGTTGGTATCGCAGCAGTCACACCTCCAGAAAAGGGAAGAGAAGAAGAAATTCCGATGTTGGGTATGGTGTCCCAAAATATAAACTCTTTGGTCGTTGTTGAAGAAGGTTTAACCCCAGAAATCGAGGATGATGATTTGATATCGCTGGAAGGTGATCCAATTATTGATAGTTCTTCTCTTTCAGTAGCCAGTGAGAATAGTAGTTTTTGTGGAGATGAGTTCATTAGTTCTGAGGTTTCTGCAGATTTAGGGACAACAAGTTCCATAGACATAGAAAAAAGCATCACAAGTGTAAAAATTGCTGCCAGGGCTACTGATTTGGGTGTGTCAAATGTAGTGGCAGATGTAGCAGTTAGCCTTGAAGAAGAGACAGGACTTAGATCTGGCCCAAAGCCTACTACTGGCGTTCTTCATCAACTAACTCTGGAAAGATCTGTGAGTGGAACAGTTGGTAGAAGTGTTTTTGAATTAGATTGTACTCCACTTTGGGGATTTACATCTGTGTGTGGAAAAAGGCCCGAGATGGAAGATGCACTTGCAGCTGTACCTCGATTATTGAAAATTCCTATTCAAATGCTAACTGGTGATAGGGTACCTGATGGAATAGACAAATGTTTCAGGGAGCAGACAATACATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAACTATTGCCGCGAGCGCATGCATTTTGCCTTGGCTGAGGAAATAGAATCTACCAAGGAAGGTCTATTGGCTGAAAGTACCAAGAATGATTGTCGAGATCTGTGGAAAAAAGCTTTCACTAGTTGTTTTTTGAAGGTTGATTCTGAAGTTGGGGGGGAAGTTAATTCTGATCCTGTTGCCCCTGAAACTGTTGGATCCACTGCTGTTGTTGCCGTTATATGTTCATCTCATATTGTAGTTTCAAACTGTGGTGATTCAAGAGCAGTTCTGTGTCGTGGCAAAGAACCCATGGCCCTATCTGATGATCATAAACCAAATCGAGGTGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAGGGTGATACAATGGAATGGTCACCGAGTTTTTGGTGTTCTCGCCATGTCAAGGTCTATTGGTGATAGGTATTTGAAGCCATGGATTATTCCAGACCCTGAGGTGAGGTTTATTCCTCGTGCGAAAGATGATGAATGCCTCATTCTGGCCAGTGATGGCCTGTGGGATGTCATGACAAATGAAGAGGTGTGTGACATTGCTCGGCGGCGCATACTTCTCTGGCACAAGAAAAATGGTTTGGCACTGCCCTCTGAAAGGGGAGAGGGAATTGATCCTGCTGCACAAGCAGCTGCAGAGTACCTATCAAACCGCGCCCTTCAGAAAGGAAGCAAAGACAACATCACTGTGATTGTGGTGGATTTGAAAGCTCAAAGAAAGTTCAAGAGCAAGACATGA 1638 0.4365 MEEMSATVAVPLRVGNSVCDKPTITTHMDVSRIKLMADTGLLSNSITKVSTDTFIGSDEDHDGDCLEEEVGIAAVTPPEKGREEEIPMLGMVSQNINSLVVVEEGLTPEIEDDDLISLEGDPIIDSSSLSVASENSSFCGDEFISSEVSADLGTTSSIDIEKSITSVKIAARATDLGVSNVVADVAVSLEEETGLRSGPKPTTGVLHQLTLERSVSGTVGRSVFELDCTPLWGFTSVCGKRPEMEDALAAVPRLLKIPIQMLTGDRVPDGIDKCFREQTIHFFGVYDGHGGSQVANYCRERMHFALAEEIESTKEGLLAESTKNDCRDLWKKAFTSCFLKVDSEVGGEVNSDPVAPETVGSTAVVAVICSSHIVVSNCGDSRAVLCRGKEPMALSDDHKPNRGDEYARIEAAGGRVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVRFIPRAKDDECLILASDGLWDVMTNEEVCDIARRRILLWHKKNGLALPSERGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02016 545 PANTHER PROTEIN PHOSPHATASE 186 535 IPR015655 GO:0004722|GO:0006470
Lapu9g02016 545 SMART PP2C_4 221 533 IPR001932 -
Lapu9g02016 545 CDD PP2Cc 233 535 IPR001932 -
Lapu9g02016 545 ProSitePatterns PPM-type phosphatase domain signature. 282 290 IPR000222 GO:0043169
Lapu9g02016 545 FunFam Protein phosphatase 2C 16 219 545 - -
Lapu9g02016 545 SUPERFAMILY PP2C-like 227 536 IPR036457 -
Lapu9g02016 545 Gene3D - 218 545 IPR036457 -
Lapu9g02016 545 Pfam Protein phosphatase 2C 263 528 IPR001932 -
Lapu9g02016 545 ProSiteProfiles PPM-type phosphatase domain profile. 231 535 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02016 Lapu-Chr9 34967053 34971523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02016 1 545 PP2C-type Phosphatase Gene Family AT1G17550 47.247 3.96e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02016 K14497 - gmx:102662702 956.051