Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02012 ATGAGTGATAATAATCCCAAACCACCAGACTCACCTGACAGTGATTTCACCAAGCAATGGCCTTCGGAACTCTCTGGGTACCTGAATCTCGACGATGATCAATGGCCAGATGACGATCTTGATTCATTTGTTTCAGGGCATGTTCTCAGCCATAACATTCAAGCCAATGAAGTTGGTGACCTTGGAGGAAGTAGCACCCAGCATGAAGAGTTTTCTAGAGACGTTGGTAATGAACATGAGAAGAAGGAGGTGAGAGATAGAGTTGCATTCATAACGAAGTCAGAGATAGAAATAATGGATGACGGGTTCAGGTGGAGGAAGTACGGAAAGAAGAAGGTGAAAAACAGCCCCAATCCAAGGAACTACTACAAGTGTCTAGTGGAAGGATGTTCAGTGAAAAAAATGGTTGAAAGAGACAAGGATGATGCGAGGTATGTAATAACAACCTACAAAGGCACCCACACTCACCCAGGTCACAGTTAA 483 0.4389 MSDNNPKPPDSPDSDFTKQWPSELSGYLNLDDDQWPDDDLDSFVSGHVLSHNIQANEVGDLGGSSTQHEEFSRDVGNEHEKKEVRDRVAFITKSEIEIMDDGFRWRKYGKKKVKNSPNPRNYYKCLVEGCSVKKMVERDKDDARYVITTYKGTHTHPGHS* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02012 160 MobiDBLite consensus disorder prediction 55 70 - -
Lapu9g02012 160 SMART WRKY_cls 99 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g02012 160 MobiDBLite consensus disorder prediction 1 31 - -
Lapu9g02012 160 FunFam WRKY transcription factor 57 85 159 - -
Lapu9g02012 160 ProSiteProfiles WRKY domain profile. 94 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g02012 160 MobiDBLite consensus disorder prediction 55 79 - -
Lapu9g02012 160 Pfam WRKY DNA -binding domain 100 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g02012 160 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 157 IPR044810 GO:0003700
Lapu9g02012 160 Gene3D WRKY domain 86 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g02012 160 SUPERFAMILY WRKY DNA-binding domain 91 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g02012 160 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02012 Lapu-Chr9 34937642 34938388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02012 33 156 WRKY Transcription Factor Family AT5G26170 53.191 6.02e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g02012 WRKY 6.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02012 - - gmx:100819462 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02012 9 34937642 34938388 Lapu9g02012 9 34937642 34938388 ECH