Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02009 ATGAGTTTGGGCACCGCCGAGGACGATTCGAGTTCTGAAATCCACATCCCAGCAGAGATTGACTGGCACATGTTGGATAAGTCCAAGTTTTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTTTCCTTCACGCTCTACCCAATGGTCGTGTTGAAGACGCGCCAGCAGGTTTCCTCCTCGCGCTTCTCCTGCCTCAACATGTCCTGCGCCATTATGCGCTACGAGGGCCTCAGAGGCTTCTACAAAGGCTTCGGCACTTCCCTCATGGGAACCGTCCCTGCGCGTGCGCTCTACATGGCGTCGCTCGAAGTCACAAAAAGTAACGTCGGCACTGCTTTTCTCGAATTGGGGTTCTCCGAGACGACTGCTGTGGCGGTGGCTAATGCCGCCGCGGGTGTTACTTCCGCCATGGCGGCGCAGCTGGTGTGGACCCCAGTTGATGTCGTGAGTCAACGGCTCATGGTTCAGGGGAATGGAGGGAGTAAAAGCATTCTGGCGAATCTGAATTCTGAGAGTTACAGGAACGGGTTTGACGCGTTTAGGAAGATTCTGTATGCTGATGGAGCAAGAGGGTTCTACAGAGGATTTGGGATTTCGATATTGACTTATGCTCCTTCCAATGCTGTTTGGTGGACTTCTTATTCCATGGTTCACAGACTCATTTGGGGTGCTTTTGGTTCCTACATGACTAAGGGTAAGAGTGAAAATAATGATAATTTGAGTGGTTTTAGGCCTGATTCGAAGACAATGGTGGCGGTTCAAGGGTTGAGTGCGGTTATGGCTAGTGGGGTATCTGCAATTGTGACAATGCCTTTTGATACTATTAAAACAAGGTTGCAGGTGTTGGATAGTGAAGAGCATGGGAGAAGAAGGCCTTTAACTTTTGTTCAGACGGTGAGGAATTTGATGAAGGAAGGTGGATTGCTTGCTTGTTACAGAGGATTGGGACCAAGATGGGCTTCCATGTCATTGTCTGCTACAACTATGATTACCACTTACGAGTTTTTGAAAAGAATGTCTACCAAGAGTCAAGAGGATTTGACTGCGTGA 1050 0.4943 MSLGTAEDDSSSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSFTLYPMVVLKTRQQVSSSRFSCLNMSCAIMRYEGLRGFYKGFGTSLMGTVPARALYMASLEVTKSNVGTAFLELGFSETTAVAVANAAAGVTSAMAAQLVWTPVDVVSQRLMVQGNGGSKSILANLNSESYRNGFDAFRKILYADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYMTKGKSENNDNLSGFRPDSKTMVAVQGLSAVMASGVSAIVTMPFDTIKTRLQVLDSEEHGRRRPLTFVQTVRNLMKEGGLLACYRGLGPRWASMSLSATTMITTYEFLKRMSTKSQEDLTA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02009 349 SUPERFAMILY Mitochondrial carrier 23 336 IPR023395 -
Lapu9g02009 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 345 - -
Lapu9g02009 349 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Lapu9g02009 349 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Lapu9g02009 349 Gene3D Mitochondrial carrier domain 166 349 IPR023395 -
Lapu9g02009 349 Gene3D Mitochondrial carrier domain 15 165 IPR023395 -
Lapu9g02009 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Lapu9g02009 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Lapu9g02009 349 Pfam Mitochondrial carrier protein 36 108 IPR018108 -
Lapu9g02009 349 Pfam Mitochondrial carrier protein 251 343 IPR018108 -
Lapu9g02009 349 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Lapu9g02009 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02009 Lapu-Chr9 34916497 34918879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02009 1 345 Chloroplast and Mitochondria Gene Families AT1G72820 65.230 3.76e-164 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02009 K15121 - gmx:100784202 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02009 9 34916497 34918879 Lapu9g02009 9 34916497 34918879 ECH