Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g02002 ATGAATTTAAGTGAAAGCCCAACTACTCACCACCACCCTTCTCGCCAATCATCAAAGTCAAAGACTGGATGCTGTCGAGGCTTGAGCAGCGTTAGGACGGTGTCGTCCACCGCCCCAACCTTGCAACACCATCAGCTTCACCAGCTTTACCAAAAATTGGAACAAAAGGTCGCAGGTTTGGAAAAAGAGGTGCAGAGGCAGACGGAACTGCGTGTTATGTATAGGAAAAGAATGGAAAAGACGCAGGATTACTTAAAATACTGTCTCCAAATAGCACAAGAAAATGGAATCTTGGACCTCATCATCCACTCCAATGGTGAAGTCTCCCAATCTCCTCTCTCTCCACATGCACTCATCAACTCCACCACCACTCCTTCACACCACCACCCCAATCTAATGCCCATCGTTGATCAAGCCAAAATCAATGGATGGTTCATCAACCCTAGCGAGATTCAGCTGGGAGAAAAGATAGGGCAGGGAACCACGGCGGAGATTCATAGAGGGACGTGGCGCGGATTTGACGTGGCAGTGAAGTGCATGTCTGCCACATTCTTCAGCAAAAATGAAAACGGTGTCGTATTCTTCGCTCAGGAGGTTGAAACCCTCTCGAAGCAGCGTCACCGGTTTGTGCTTCACCTCATGGGTGCGTGTCTCGACCCTCCGCATCATGCATGGGTGGTTACCGAGTATCTCAACACCACGCTCAAGGAGTGGCTACATGGGCCGGGCAAAAGGCCCAAACACAGAACCACGCCACTTCCTCCCTTCAAGGACAGGGTGATGCGGGCCCTGGAAATAGCCCAGGCCATGCACTACCTCCACGAACAAAAGCCCAAGGTCATCCATCGGGACTTGAAGCCCAGCAACATCTTCTTGGACGACGCATTGCATGTTAGAGTGGCGGATTTTGGACACGCACGGTTCTTGGGTGATGACGAAATGGCCCTCACTGGAGAAACAGGAACATACGTGTATATGGCACCGGAGGTTATTCGGTGCGAGCCCTATGATGAAAAATGTGATGTATACAGTTTTGGGATCATACTCAATGAGTTGCTCACTGGAAAATACCCTTATATTGAGACGCAATTTGGTCCCGCCAAGATTGCTATGGAAGTTGTGGAGGATGAACTAAGGCCTGTGCTTGCATCAAGCGAAGATGGTGACCAATTGGGAGAACTGATTGACCTAATATGCCTTTGCTGGAATGCAAACCCATCCACTCGACCATCCTTCGCAACAATTAGTCATACCCTCAAATCTTATGTCGAGAGGGTCCTCCAAATTTCAGAATAA 1296 0.4923 MNLSESPTTHHHPSRQSSKSKTGCCRGLSSVRTVSSTAPTLQHHQLHQLYQKLEQKVAGLEKEVQRQTELRVMYRKRMEKTQDYLKYCLQIAQENGILDLIIHSNGEVSQSPLSPHALINSTTTPSHHHPNLMPIVDQAKINGWFINPSEIQLGEKIGQGTTAEIHRGTWRGFDVAVKCMSATFFSKNENGVVFFAQEVETLSKQRHRFVLHLMGACLDPPHHAWVVTEYLNTTLKEWLHGPGKRPKHRTTPLPPFKDRVMRALEIAQAMHYLHEQKPKVIHRDLKPSNIFLDDALHVRVADFGHARFLGDDEMALTGETGTYVYMAPEVIRCEPYDEKCDVYSFGIILNELLTGKYPYIETQFGPAKIAMEVVEDELRPVLASSEDGDQLGELIDLICLCWNANPSTRPSFATISHTLKSYVERVLQISE* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g02002 431 Gene3D Phosphorylase Kinase; domain 1 139 231 - -
Lapu9g02002 431 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 42 420 - -
Lapu9g02002 431 Pfam Protein kinase domain 153 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02002 431 Gene3D Transferase(Phosphotransferase) domain 1 232 429 - -
Lapu9g02002 431 ProSiteProfiles Protein kinase domain profile. 151 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02002 431 MobiDBLite consensus disorder prediction 1 26 - -
Lapu9g02002 431 CDD STKc_MAP3K-like 157 419 - -
Lapu9g02002 431 SUPERFAMILY Protein kinase-like (PK-like) 121 417 IPR011009 -
Lapu9g02002 431 ProSitePatterns Protein kinases ATP-binding region signature. 157 178 IPR017441 GO:0005524
Lapu9g02002 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Lapu9g02002 431 SMART serkin_6 151 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g02002 431 Coils Coil 43 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g02002 Lapu-Chr9 34874339 34875989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g02002 132 426 MAP Kinase Kinase Kinase AT4G35780 35.216 2.16e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Lapu9g02002 Pkinase 8.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g02002 - - vum:124826171 779.245