Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01991 ATGGCTACACGTCTCTTCAGACATCCTCTGGCTTCGCAACCCAAGCTCTGCTTCAATTACACGCCCAAACATGCTGCCCAATTCATCTCTCCCACCAAACGACGTCGCAACCGCTACCGCCATGAGGTTCTCCGTCCATCATTCGCTGTATCCAGCTCCTTCCGGACCGAGATTGGCTCACCGGAATCAGCTCTTATCCGAGGTCAGAAAGAGAGAAAAGACTCGCCGGTTCTGCTAGACGTCACCGGCATGATGTGCGGGGCGTGCGTCTCCCGAGTCAAAAACATCCTGTCCGCTGACCAACGAGTCGACTCGGTCGTGGTCAACATGCTGACTGAGACCGCCGCTGTTAATCTGCGCCGTATCGAGGAGGAACCGGCGAGCGTCGCGGACAGCCTCGCACGGAGACTGAGCGACTGCGGATTTCCAACGAAGCGGAGAGCGTCGAGTTCGGGAGTGATGGAAAACGTGAGGAAGTGGAAGGAATTGGTGAAGAAGAAGGAGGAATTGGTCGCTAAGAGTCGAAGCCGCGTCGCCTTCGCTTGGACATTGGTCGCATTGTGCTGTGGATCGCATGCTTCGCATATCTTTCACTCTTTGGGGATCCACATTGCTCATGGGTCGCTTTGGGAGATTCTTCATAGTTCGTACGTGAAAGGTGGTTTAGCTTTGGGGGCTCTATTGGGACCAGGACGAGAGTTACTCTTTGATGGCCTAAATGCATTTAAGAAGGGGTCGCCTAATATGAACTCTCTCGTGGGATTTGGTTCTATAGCTGCATTCATCATTAGTTCCATCTCGCTACTTAACCCCGGCCTAGCGTGGGATGCATCGTTCTTTGATGAACCGGTGACTTTCTTTACTTTTACTTGTTCTGATATTTCTCCTCATGTGAGAATTGAATATTTTAGCGTGCAGGTCATGCTTCTTGGTTTCGTGCTTCTGGGACGTTCTCTGGAGGAAAAGGCGAGGATCCAGGCTTCTAGCGATATGAATGAACTGCTTTCACTGATATCTACTCAGTCAAGACTTGTGATTACTTCAACAGAAGCTTCACCTTCTACTGATACTGTGCTTTGCTCTGATGCAATTTGTGTTGAAGTCCCAACGGATGATATTCGAGTAGGTGATTCTGTGTTGGTGTTGCCTGGAGAAACTATTCCTATAGATGGAAAGGTTGTTTCAGGAAGAAGTGTTGTAGATGAATCCATGCTTACAGGGGAATCACTTCCTGTATTTAAGGAGAAAGGCCTCATAGTTTCAGCAGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGTTCCAACACTATGATATCAAAGATTGTACGCATGGTTGAGGATGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCAGATTCAATAGCAGGGCCATTTGTATACAGTGTAATGACTCTGTCAGCAGCAACATTTGCATTTTGGTATTTTGTTGGATCACAGATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCAGAAGGGGATCCTTTGCTTTTGAGTTTGAAACTATCTGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCATTGGGTCTTGCTACGCCCACAGCAATCCTGGTTGGCACCTCACTTGGAGCAAGAAAAGGACTTCTTATTAGGGGAGGGGATGTGCTGGAACGCTTGTCCGGAATAAATTATATTGCTCTAGACAAGAAGGAAGAAGATTTACTAGCACTGTGCTTTCAGACAGGAACCCTGACGAAAGGAAAACCAGTTGTGTCGGCCATAGGCTCTATCCATTATGGAGAGTCTGAAATTCTTCGGATTGCTGCTGCAGTGGAGAAGACTGCAAATCACCCAATAGCAAAGGCTATTATCGATAAAGCTGAGTCACTGGAGTTGATCCTTCCTGTCACAAAGGGACAGTTAGTTGAACCGGGTTTTGGTACTTTAGCAGAAGTAGACGGGGATTTGATTGCAGTTGGGTCTTTGGAATGGGTTCGAGACCGCTTCCAAACAAGAGTGAACCCATCTGATCTGACAAATCTGGAACATAGTTTGATTAATCATTCGTCAAATACGACATCTTCTAACTATTCAAAAACTGTTGTTTATGTTGGACGTGAAGGAGAAGGCGTCATTGGTGCTATTGCCATATCTGACACTGTGCGTGAAGATGCTCAATCTACTGTGATGAGGCTCAAGCAGAAGGGGATTAAAACGGTCCTCTTGTCCGGAGATAGGGAAGAGGCAGTTGCAACAGTAGCAGATACAGTTGGAATTGAAAATGATTTTGTCAAAGCGTCTTTGTCTCCACAACAGAAATCTAGATTTATTTCCTCTCTAAAAGCTGCCGGACATCATGTTGCGATGGTAGGAGATGGGATAAATGATGCACCCTCTTTGGCTGTAGCTGATGTTGGAATTGCTCTGCAGAATGAAGCTCAAGAGAATGCCGCCTCGGATGCAGCATCTATTATACTTCTAGGGAACAAAATTTCACAAGTTGTCGATGCGCTAGACCTAGCACAGGCAACAATGGCAAAAGTGTACCAGAATTTGTCATGGGCGGTCGCCTATAATGCTGTTGCCATTCCCGTAGCTGCTGGTGTGTTACTTCCCCAATTTGACTTTGCTATGACACCGTCACTTTCAGGAGGACTGATGGCACTGAGCTCCATCTTCGTGGTTAGCAACTCATTGCTTCTACAGCTTCATGGATCTCCAATCTCTAGAAAGGGCTAA 2745 0.4659 MATRLFRHPLASQPKLCFNYTPKHAAQFISPTKRRRNRYRHEVLRPSFAVSSSFRTEIGSPESALIRGQKERKDSPVLLDVTGMMCGACVSRVKNILSADQRVDSVVVNMLTETAAVNLRRIEEEPASVADSLARRLSDCGFPTKRRASSSGVMENVRKWKELVKKKEELVAKSRSRVAFAWTLVALCCGSHASHIFHSLGIHIAHGSLWEILHSSYVKGGLALGALLGPGRELLFDGLNAFKKGSPNMNSLVGFGSIAAFIISSISLLNPGLAWDASFFDEPVTFFTFTCSDISPHVRIEYFSVQVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSTEASPSTDTVLCSDAICVEVPTDDIRVGDSVLVLPGETIPIDGKVVSGRSVVDESMLTGESLPVFKEKGLIVSAGTINWDGPLRIEASSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFWYFVGSQIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLSGINYIALDKKEEDLLALCFQTGTLTKGKPVVSAIGSIHYGESEILRIAAAVEKTANHPIAKAIIDKAESLELILPVTKGQLVEPGFGTLAEVDGDLIAVGSLEWVRDRFQTRVNPSDLTNLEHSLINHSSNTTSSNYSKTVVYVGREGEGVIGAIAISDTVREDAQSTVMRLKQKGIKTVLLSGDREEAVATVADTVGIENDFVKASLSPQQKSRFISSLKAAGHHVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKISQVVDALDLAQATMAKVYQNLSWAVAYNAVAIPVAAGVLLPQFDFAMTPSLSGGLMALSSIFVVSNSLLLQLHGSPISRKG* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01991 914 Pfam Heavy-metal-associated domain 79 142 IPR006121 GO:0046872
Lapu9g01991 914 SFLD C1.7: P-type atpase like 551 845 - -
Lapu9g01991 914 Pfam E1-E2 ATPase 352 548 - -
Lapu9g01991 914 Gene3D - 582 843 IPR023214 -
Lapu9g01991 914 ProSiteProfiles Heavy-metal-associated domain profile. 75 145 IPR006121 GO:0046872
Lapu9g01991 914 Gene3D - 69 148 - -
Lapu9g01991 914 CDD HMA 79 143 IPR006121 GO:0046872
Lapu9g01991 914 Gene3D - 324 455 - -
Lapu9g01991 914 SFLD p-type atpase 551 845 IPR044492 -
Lapu9g01991 914 PRINTS P-type cation-transporting ATPase superfamily signature 579 593 - -
Lapu9g01991 914 PRINTS P-type cation-transporting ATPase superfamily signature 792 811 - -
Lapu9g01991 914 PRINTS P-type cation-transporting ATPase superfamily signature 715 726 - -
Lapu9g01991 914 PRINTS P-type cation-transporting ATPase superfamily signature 737 747 - -
Lapu9g01991 914 PRINTS P-type cation-transporting ATPase superfamily signature 401 415 - -
Lapu9g01991 914 SUPERFAMILY Calcium ATPase, transduction domain A 361 451 IPR008250 -
Lapu9g01991 914 SUPERFAMILY HMA, heavy metal-associated domain 77 142 IPR036163 GO:0046872
Lapu9g01991 914 FunFam Copper-transporting ATPase PAA2, chloroplastic 590 723 - -
Lapu9g01991 914 NCBIfam heavy metal translocating P-type ATPase 249 903 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lapu9g01991 914 Pfam haloacid dehalogenase-like hydrolase 583 806 - -
Lapu9g01991 914 Gene3D - 590 723 IPR023299 GO:0000166
Lapu9g01991 914 FunFam Copper-transporting ATPase 1, putative 324 455 - -
Lapu9g01991 914 NCBIfam HAD-IC family P-type ATPase 352 884 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu9g01991 914 SUPERFAMILY HAD-like 583 900 IPR036412 -
Lapu9g01991 914 PANTHER ATP7, ISOFORM B 68 905 - -
Lapu9g01991 914 SUPERFAMILY Calcium ATPase, transmembrane domain M 309 562 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01991 Lapu-Chr9 34777383 34787230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01991 240 909 Primary Pumps ATPases AT1G63440 34.513 1.71e-107 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01991 K17686 - gmx:100127402 1464.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01991 9 34777383 34787230 Lapu9g01991 9 34777383 34787230 ECH