Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01990 ATGGCGTTTTGGTTTGGACTCCTTCTGGTTCTTCTCCTTTGTTTGGATTCAGTGAATTCTCACGACGGAGAAACGTTGTTGGAGATGAAGAAGTCGTTGAGGGATGTGGATAACGTTCTGTTTGACTGGACTGATACACCTTCTTCAGATTATTGTGTTTGGAGAGGGGTTACGTGTGATAATGTCACTTTCAATGTGGTTGCACTGAATCTTTCAGGATTGAATCTTGAGGGCGAAATTTCACCTGCATTAGGGAGGCTTAGCAGCTTGGTCTCTATTGATCTCAAGGAAAACCGTTTATCTGGTCAGATACCTGATGAGCTTGGTGACTGTTCCTCTTTGAAAAACATAGACTTGTCCTTTAACAACATTCGGGGAGATATACCGTTTTCCATTTCGAAGATGAAACAACTGGAAAATCTAATCTTGAAGAATAATCAGCTGATTGGACCAATTCCTTCAACTCTCTCTCAGGTTCCTAACTTAAAGATTCTAGACCTAGCACAGAATAATTTCAGTGGGGAGATACCAAGACTTGTATACTGGAATGAAGTTTTGCAATATCTTGGCTTGCGAGGTAACAACTTGTCGGGTTCACTTTCTCCAGACATATGCCAGTTAACTGGTTTGTGGTATTTTGACGTGAGAAACAATAGCTTGACAGGCAGTATTCCTGAAAACATAGGCAATTGTACCACTTTCCAGGTCTTGGATTTATCCTACAACGAGCTATCTGGAGAGATACCATTCAATATTGGTTTCCTGCAAGTAGCAACTCTGTCATTGCAAGGCAATAAACTCTCAGGTCATATTCCATCAGTTATTGGTCTGATGCAAGCTCTTGCTGTCTTAGATTTGAGTTGTAACATGCTAAGTGGGCCAATCCCTCCTATATTGGGAAATTTGACCTACACAGAAAAATTGTATTTGCATGGAAACAAGCTGACTGGCTTCATCCCCCCAGAGCTGGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCATTTAAGCGGACATATCCCGCCTGAGCTTGGAAAGCTTACGGATCTGTTTGACTTAAATGTTGCCAATAACAACATCGAGGGTCCAATTCCTGGTAATCTCAGCTCATGTATAAACCTCAACAGCCTCAATGTGCATGGGAATAAGCTGAGTGGAACAATTCCCTCAGCTTTTCAAAGCTTGGAGAGTATGACCTATCTGAATCTTTCTTCAAACAATCTTCAAGGGTCTATTCCAATTGAACTTTCACGGATCGGTAATTTGGATACACTGGATATATCAAATAATAATATAGTTGGTTCCATTCCTTCTTCCGTTGGTGATTTGGAACATCTTCTGAAGTTGAACCTGAGCAGAAATCATTTAACAGGCTTTATTCCGGCAGAATTTGGTAATCTAAGAAGTGTCATGGACATTGATCTTTCAAATAATCAACTCTCTGGCTTGATCCCTGAAGAACTTAGTCAGCTTCAGAACATGATATCTTTGAGACTAGAAAAGAACAAATTATCTGGGGATGTGTCTTCTCTTGTAAATTGCCTTAGTCTCTCTATGATTAATGTATCTTACAACAATTTAGTTGGTGTTATTCCTACAAGCAACAATTTTTCCAGGTTTCCCCCTGATAGTTTCATTGGAAACCCTGGTCTCTGTGGCTTTTGGCTGAATACATCTTGTCGAGGGTCTCAACCCACCGAGCGAGTTAACTTGTCTAAGGCAGCTATCCTGGGAATTGCGCTAGGTGCCCTTGTGATTCTTTTCATGGTGTTGTTTGCAGCTTGCCGACCACACAATCCAGCCCCTACCCCCGACGGATCTTTTGACAAACCAGTTAATTACTCACCTCCGAAGCTAGTGATTCTTCACATGAATATGGCACTTCATGTATATGATGATATAATGAGGATGACTGAAAACCTAAGTGAGAAGTATATAATTGGGTATGGTGCATCAAGTACTGTTTACAAATGTGTTCTGAAGAATTGCAAGCCAGTGGCTATCAAGAAGCTCTATTCCCACTACCCCCAATGCTTGAAGGAGTTTGAGACTGAGCTTGAGACAGTTGGCAGCATTAAACACAGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCTCCATTTGGAAACCTCCTCTTTTATGATTACATGGAATATGGCAGTCTGTGGGATCTTCTTCATGGACCTACCAAGAAGAAAAAGCTTGATTGGGATGTTCGTCTAAAAATAGCACTTGGATCAGCCCAAGGCCTGGCTTATCTACACCATGATTGCTGTCCACGTATCATTCATAGGGATGTGAAATCATCTAATATATTACTAGACAAAAGCTTTGAGCCCCATCTCACCGATTTTGGTATTGCAAAGAGTCTATGCCCCTCTAAGTCTCATACTTCAACTTACATAATGGGCACAATTGGCTACATAGACCCCGAGTATGCTAGAACCTCCCGGCTCACTGAGAAGTCTGATGTGTATAGCTACGGTATTGTATTACTTGAGCTGCTAACTGGGAGGAAAGCTGTGGAAAACGAATCAAACCTTCATCATCTGATTTTGTCCAAGACAGCTAATGATGCCGTAATGGAAACCGTTGATCCAGATATTAGTGACACATGCAAGGACATGGGAGCAGTAAAAAAGGTTTTTCAGCTTGCTCTTTTATGCACCAAGAAGCAACCAGTGGATAGACCCACAATGCACGAGGTGACGCGCGTGCTGGGAAGTCTAGTGCCACCAAAAGAATCAGTCCCAATGCATGCACTCCTACCTGATTCACAGCCATCTGCTAAAATGCAATCCTACAAGGATGAATATGCCAATCTTAAAACTCCTCACTTGGTCAACTGTCCCTCCATCAGCACCTCTGATGCCCAACTCTTCCTCAAATTTGGAGAAGTAATATCTCAGAACAGCCAGTGA 2931 0.4179 MAFWFGLLLVLLLCLDSVNSHDGETLLEMKKSLRDVDNVLFDWTDTPSSDYCVWRGVTCDNVTFNVVALNLSGLNLEGEISPALGRLSSLVSIDLKENRLSGQIPDELGDCSSLKNIDLSFNNIRGDIPFSISKMKQLENLILKNNQLIGPIPSTLSQVPNLKILDLAQNNFSGEIPRLVYWNEVLQYLGLRGNNLSGSLSPDICQLTGLWYFDVRNNSLTGSIPENIGNCTTFQVLDLSYNELSGEIPFNIGFLQVATLSLQGNKLSGHIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMTKLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNIEGPIPGNLSSCINLNSLNVHGNKLSGTIPSAFQSLESMTYLNLSSNNLQGSIPIELSRIGNLDTLDISNNNIVGSIPSSVGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMISLRLEKNKLSGDVSSLVNCLSLSMINVSYNNLVGVIPTSNNFSRFPPDSFIGNPGLCGFWLNTSCRGSQPTERVNLSKAAILGIALGALVILFMVLFAACRPHNPAPTPDGSFDKPVNYSPPKLVILHMNMALHVYDDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSLSPFGNLLFYDYMEYGSLWDLLHGPTKKKKLDWDVRLKIALGSAQGLAYLHHDCCPRIIHRDVKSSNILLDKSFEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVENESNLHHLILSKTANDAVMETVDPDISDTCKDMGAVKKVFQLALLCTKKQPVDRPTMHEVTRVLGSLVPPKESVPMHALLPDSQPSAKMQSYKDEYANLKTPHLVNCPSISTSDAQLFLKFGEVISQNSQ* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01990 976 Gene3D Ribonuclease Inhibitor 257 341 IPR032675 -
Lapu9g01990 976 Pfam Protein kinase domain 647 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01990 976 Gene3D Ribonuclease Inhibitor 19 182 IPR032675 -
Lapu9g01990 976 ProSiteProfiles Protein kinase domain profile. 644 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01990 976 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 184 293 - -
Lapu9g01990 976 SUPERFAMILY Protein kinase-like (PK-like) 621 910 IPR011009 -
Lapu9g01990 976 SMART LRR_typ_2 470 493 IPR003591 -
Lapu9g01990 976 SMART LRR_typ_2 159 183 IPR003591 -
Lapu9g01990 976 SMART LRR_typ_2 398 422 IPR003591 -
Lapu9g01990 976 SMART LRR_typ_2 326 350 IPR003591 -
Lapu9g01990 976 SMART LRR_typ_2 207 231 IPR003591 -
Lapu9g01990 976 SMART LRR_typ_2 446 469 IPR003591 -
Lapu9g01990 976 SMART LRR_typ_2 87 111 IPR003591 -
Lapu9g01990 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672|GO:0006468
Lapu9g01990 976 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 294 566 - -
Lapu9g01990 976 SUPERFAMILY RNI-like 200 533 - -
Lapu9g01990 976 Pfam Leucine rich repeat 376 435 IPR001611 GO:0005515
Lapu9g01990 976 SUPERFAMILY L domain-like 23 255 - -
Lapu9g01990 976 SMART serkin_6 644 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01990 976 Gene3D Ribonuclease Inhibitor 439 565 IPR032675 -
Lapu9g01990 976 Gene3D Ribonuclease Inhibitor 342 438 IPR032675 -
Lapu9g01990 976 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 19 183 - -
Lapu9g01990 976 Gene3D Transferase(Phosphotransferase) domain 1 720 920 - -
Lapu9g01990 976 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 615 719 - -
Lapu9g01990 976 Gene3D Phosphorylase Kinase; domain 1 617 719 - -
Lapu9g01990 976 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 158 911 - -
Lapu9g01990 976 Gene3D Ribonuclease Inhibitor 183 256 IPR032675 -
Lapu9g01990 976 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 720 920 - -
Lapu9g01990 976 Pfam Leucine rich repeat N-terminal domain 20 60 IPR013210 -
Lapu9g01990 976 Pfam Leucine Rich Repeat 449 470 IPR001611 GO:0005515
Lapu9g01990 976 ProSitePatterns Protein kinases ATP-binding region signature. 650 673 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01990 Lapu-Chr9 34762388 34769705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01990 89 975 Receptor kinase-like Gene Family AT5G07180 64.077 0.0 1135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lapu9g01990 Pkinase 6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01990 K20718 - gmx:100804875 1756.88