Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01974 ATGGACACGGACATGGAGAAGCATGTCATGCGTGGTGCTACTGATTCTAAGACTGACCACAAGTCGTACAAAGGGGTGAGAAAGAGAAAGTGGGGGAAATGGGTTTCTGAAATCAGACTTCCCAATAGCCGTGAACGCATATGGCTAGGCTCTCACGACTCTCCTGAAAAGGCAGCACGAGCCTTCGATGCTGCCCTTTTCTGCCTACGTGGTCGCCATGCCAATTTCAACTTCCCCAGCACTCCTTGCAACATGGACACCAATGTGGCTGCGGCTCTCGCTGCTCACCAGTCTCTTACCTCGCAGGAGATTCAAGAGGTTGCTGCTAAGTTTGCAAACCAGGACCCACTACTTCTAAAACCTCTTAGTCAAGAATCTCAACGTGCTGCTGCTGCTCCTGCTGGCAATTCTTCATCATTTGGAGCGAAGTTGTGTAAATCGGACAGCATAGCAGAGAGTAGTTCTAGAACCTGTACCCCCACCACCACTGCCTCGTCATGTTCTGCTACTATGCACGAATATGATGGAACGGTGCAACAAGTGGACCATGGGGACATGGATTGGACATTCTTGAACGAGTTTGATTACTCCAACGAAGTTTTTCCTGTTGGATCCGACTATGATCTCTATTTTGAGCTACACCAGATGCACTCAACTTCAGGTGAGTTATTGTATTCCACTCCACCCCCACCTCCTTTCGAGGGTCACCAAGAATTGATTGAAGCCGAAGAAGATCCTTTTTCTCACCAATCATTCCTTTGGAATTGGAACTTTTGA 777 0.4813 MDTDMEKHVMRGATDSKTDHKSYKGVRKRKWGKWVSEIRLPNSRERIWLGSHDSPEKAARAFDAALFCLRGRHANFNFPSTPCNMDTNVAAALAAHQSLTSQEIQEVAAKFANQDPLLLKPLSQESQRAAAAPAGNSSSFGAKLCKSDSIAESSSRTCTPTTTASSCSATMHEYDGTVQQVDHGDMDWTFLNEFDYSNEVFPVGSDYDLYFELHQMHSTSGELLYSTPPPPPFEGHQELIEAEEDPFSHQSFLWNWNF* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01974 258 MobiDBLite consensus disorder prediction 1 21 - -
Lapu9g01974 258 SUPERFAMILY DNA-binding domain 22 79 IPR016177 GO:0003677
Lapu9g01974 258 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 161 - -
Lapu9g01974 258 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Lapu9g01974 258 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
Lapu9g01974 258 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Lapu9g01974 258 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Lapu9g01974 258 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Lapu9g01974 258 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Lapu9g01974 258 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Lapu9g01974 258 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01974 Lapu-Chr9 34594260 34595036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01974 23 224 AP2-EREBP Transcription Factor Family AT1G74930 40.865 2.21e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lapu9g01974 AP2 3.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01974 - - vra:106760431 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01974 9 34594260 34595036 Lapu9g01974 9 34594260 34595036 ECH