Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01964 AACCAGGTTCAAACTCCCCATGATGCCATTGTGAGCGGTGGGGGTCTAAGTAACAATGGAAAATTCAGCTATGGGTATGCTAGCTCTCCCGGCAAGAGATCTTCAATGGAGGATTTTTACGACACAAGAATTGATGGTGTTAATGGTGAAACCGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGAAAAACTTGTTTAGTAATTTGATCAATCACCCAAAATTCATTTCTGACACCAAATCAGCAATATCTGATGCTTATAATCATACCGATTCTGAGTTTTTGAAGTCGGAAAATAACCAAAATAAAGATGCTGGATCAACTGCTTCCACTGCGATTTTAGTTGGTGATCGCTTGTTTGTGGCAAATGTTGGAGATTCTAGAGCTGTTATATGCAGAGGTGGTAATGCTATTGCCGTTTCTCGAGATCACAAACCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGCGTTCTTGCTGTTTCTCGAGCATTTGGTGATAGACTCCTAAAGCAGTATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAGTTGACAACTCCCTAGAGTTTCTTATCCTGGCTAGTGATGGACTATGGGATGTTGTCTCAAATGAGGAAGCAGTTGGTATGATTAAACCAATTGAGGATGCTGAGGAAGCAGCAAAGAGGTTGATGCAAGAAGCATATCGGAGAGGCAGTGCAGACAATATCACATGTGTTGTGGTTCGTTTCTTGACTAACCAGGGCACTTCTTCTGATAGTAGTTCTAGAGGTGTTAATAATAAGCACCAAACTAACCAGAGCACTTCTTCTCATAGTAGTTCTGGAGGTGTTAATAATAAG 918 0.4194 NQVQTPHDAIVSGGGLSNNGKFSYGYASSPGKRSSMEDFYDTRIDGVNGETVGLFGVFDGHGGARAAEYVKKNLFSNLINHPKFISDTKSAISDAYNHTDSEFLKSENNQNKDAGSTASTAILVGDRLFVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDNSLEFLILASDGLWDVVSNEEAVGMIKPIEDAEEAAKRLMQEAYRRGSADNITCVVVRFLTNQGTSSDSSSRGVNNKHQTNQSTSSHSSSGGVNNK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01964 306 ProSiteProfiles PPM-type phosphatase domain profile. 23 269 IPR001932 -
Lapu9g01964 306 MobiDBLite consensus disorder prediction 274 306 - -
Lapu9g01964 306 ProSitePatterns PPM-type phosphatase domain signature. 54 62 IPR000222 GO:0043169
Lapu9g01964 306 Gene3D - 15 275 IPR036457 -
Lapu9g01964 306 SMART PP2C_SIG_2 34 269 IPR001932 -
Lapu9g01964 306 SMART PP2C_4 13 267 IPR001932 -
Lapu9g01964 306 SUPERFAMILY PP2C-like 17 269 IPR036457 -
Lapu9g01964 306 FunFam probable protein phosphatase 2C 59 15 273 - -
Lapu9g01964 306 PANTHER PROTEIN PHOSPHATASE 23 268 IPR015655 GO:0004722|GO:0006470
Lapu9g01964 306 Pfam Protein phosphatase 2C 50 262 IPR001932 -
Lapu9g01964 306 CDD PP2Cc 22 269 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01964 Lapu-Chr9 34478821 34481720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01964 8 288 PP2C-type Phosphatase Gene Family AT4G31750 87.189 0.0 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01964 K17506 - vra:106761292 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01964 9 34478821 34481720 Lapu9g01964 9 34478821 34481720 ECH