Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01955 ATGGGAATATATCTCAGCACTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGAGCGTCTTAGATATGGTTTATCATCAATGCAAGGGTGGCGTGCAACAATGGAAGATGCACATGCTGCATATACTGATCTGGATGATTCGACTTCATTTTTTGGTGTGTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCAAAGTTTCTCCACCAACAGGTGCTCAAAAGTGAAGCATACTTAACTGGAGATATAGGAACCTCCCTTCAGAAATCCTTTTTAAGAATGGACGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTATCAATATTGGGGGATAAGATAAACAAGTTTACTGGGATGATAGAAGGTTTGATTTGGTCTCCAAGAAGCAGTGATGGTTGCCAAGTTGATGATTGGGCTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCGGGAAGCACTGCCTGTGTTGCAGTTATCAGAAATAACCAACTCGTTGTTGCAAATGCTGGTGATTCACGATGTGTGATATCTCGGAAGGGTCAGGCATACAATTTGTCCAGAGACCACAAACCTGATCTTGAGATAGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCTGGAAGAGTTAACGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAATTTCTTCCTGCTGAAAAACAAATTTTAACTGCCAATCCAGACATAAACACTGTTGAGCTTTGTGACGAAGATGAATTTGTGGTGTTAGCTTGTGATGGCATATGGGATTGCATGTCAAGTCAACAACTGGTAGATTTTATTCATGAACAATTGCACTCGGAAACGAAACTTTCTGCCGTGTGTGAAAGAGTACTTGACCGGTGTTTGGCACCATCAACTGCCGGTGGTGAGGGATGTGACAATATGACCATGATCTTGGTACAGTTCAAAAGACCTTCTCAGTCCAGTGCATCAACAGAAGAGCAATCCTCTTCAAACGGACAAGCTGAACCTGAAACACTAGTAGAGAGAAGTGAAAGTTAG 1080 0.4157 MGIYLSTPKTEKFSEDGENERLRYGLSSMQGWRATMEDAHAAYTDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKSEAYLTGDIGTSLQKSFLRMDEMMRGQRGWRELSILGDKINKFTGMIEGLIWSPRSSDGCQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQILTANPDINTVELCDEDEFVVLACDGIWDCMSSQQLVDFIHEQLHSETKLSAVCERVLDRCLAPSTAGGEGCDNMTMILVQFKRPSQSSASTEEQSSSNGQAEPETLVERSES* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01955 359 SMART PP2C_4 13 326 IPR001932 -
Lapu9g01955 359 MobiDBLite consensus disorder prediction 329 359 - -
Lapu9g01955 359 PANTHER PROTEIN PHOSPHATASE 2C 16 327 IPR015655 GO:0004722|GO:0006470
Lapu9g01955 359 CDD PP2Cc 23 328 IPR001932 -
Lapu9g01955 359 SMART PP2C_SIG_2 28 328 IPR001932 -
Lapu9g01955 359 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Lapu9g01955 359 Gene3D - 1 329 IPR036457 -
Lapu9g01955 359 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Lapu9g01955 359 Pfam Protein phosphatase 2C 154 312 IPR001932 -
Lapu9g01955 359 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Lapu9g01955 359 MobiDBLite consensus disorder prediction 329 352 - -
Lapu9g01955 359 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Lapu9g01955 359 FunFam probable protein phosphatase 2C 60 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01955 Lapu-Chr9 34408476 34418376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01955 1 340 PP2C-type Phosphatase Gene Family AT2G25070 78.006 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01955 K17499 - gmx:100787778 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01955 9 34408476 34418376 Lapu9g01955 9 34408476 34418376 ECH