Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01945 ACTCTACGAGTGATGCTGGAAACTATGAGCAGCAAATGCCAAAAGCTTGAGTTTCTTGTTCAAGAGATCGACCATGCAGAAAAAGTGACCACCAAGTCACACCAAAGTGGGTTTGTATTAGCAAGACCCGAGTTTTCCGTAGCACAAAAGCCATCACAAGTGTTTGTTAAAACTCACCCCAAGGACAATAGTTTGATGGTAAAAGATGGTTATCAGTGGAAGAAGTATGGACAGAAGAAGGCTACCAAAGACAATCCTTCGCCTAGAGCTTATTTCAAGTGCTCCTTGGCTCCTAGCTGCCCCGTCAAGAAAAAGGTGCAAAGAAGCATACACGATAGGTCTATCCTTGTTGCCACTTATGAAGGAAAGCACAACCATGGTTTTGCTTTTGGAGATTTACTCAAGCCATCATCCTCTACACCCGAAGCCTCAATAATGGATAACGATTTACCTATGACAAACACGTCAAACGACATGAACATTGAGCTTTGTCTAAGTAATCGAGCTCAAACAGATGTAACACTTTGTGATGATGTTAAACAACAGAACAACGGTGTGAGTAACATTAAAGTTGAAGAATGCGTGAGTTGTCTGCTAAAAGATCCTAAATTCATCGTACCATTAGCTGAAGCAGTTGTCCACTCCATGAATAGCCAGAGTAAGCAAGTGGGTCTTTCTGAACCGTATTTGTGA 693 0.4185 TLRVMLETMSSKCQKLEFLVQEIDHAEKVTTKSHQSGFVLARPEFSVAQKPSQVFVKTHPKDNSLMVKDGYQWKKYGQKKATKDNPSPRAYFKCSLAPSCPVKKKVQRSIHDRSILVATYEGKHNHGFAFGDLLKPSSSTPEASIMDNDLPMTNTSNDMNIELCLSNRAQTDVTLCDDVKQQNNGVSNIKVEECVSCLLKDPKFIVPLAEAVVHSMNSQSKQVGLSEPYL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01945 230 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 36 217 IPR044810 GO:0003700
Lapu9g01945 230 SUPERFAMILY WRKY DNA-binding domain 63 127 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01945 230 Pfam WRKY DNA -binding domain 68 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01945 230 ProSiteProfiles WRKY domain profile. 62 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01945 230 Gene3D WRKY domain 52 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01945 230 SMART WRKY_cls 67 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01945 Lapu-Chr9 34344202 34345217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01945 42 219 WRKY Transcription Factor Family AT1G80840 45.745 1.25e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g01945 WRKY 3.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01945 - - gmx:121175041 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00697 8 24987964 24990021 Lapu9g01945 9 34344202 34345217 PCT