Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01944 ATGTCCCTTACTTCACAACCAAATCTTTCTTCCATGGAACCAACTTGTGTCGACACTTCTCTCAACCTTAACGTTATTCCCTCTTCACACATAGACCTCGCGGGCGAGGTTTTGGTTGAAGAGTTGCGGCGTCTAAGTAGTGAGAACAAGAGGCTAACTGAGACGCTGAACCACTTGTGCGAGAACTATGTTGCTTTGCAGAAACATTTGAGTGAGTTCAACCGACTGAAGAACGCGAATTTTGAGAAAGAAGAAATACCATCGCTGAAAAGAAAAGTCGAGAGTGAGAATTGCGCGAATCTGTTTGGTGTCAACGCTTATGCTGAGTGCGGCAATGAGGAAGAGACGTTCAAAAAGCCTAAGCAAAGTACCTCCCCAAAGGTTTACAAAGTTTGCGTACGGACAGATGCATCTGATACCAGCTTATATGTGAGGGACGGATATCAGTGGAGAAAATACGGTCAAAAAGTCACCAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGTTCCTATGCCCCAGGCTGTCCAGTGAAGAAGAAGGTGCAGAGAAGCGTAGAGGATCGAAGTGTGTTGGTAGCAACTTACGAAGGAGAGCACAACCATGGGGAACATGAAACGGAGATATCAGGGAATTGGAGGAAAAGTGAAAGCCCTTGCGGTGCAGGTTCAGTAGGTGGTGGTGGTGGTGGTGGGTCATGCTCGTCCATGAAGGGGAGTGGAGGTCCAATTATACCGCTTGAATTGGTCCAGTCAAGAGTGGTTGACATTAATGCGCAAAAGTCATGGATCCAGCAGTTTTTAGTTCAACAAATGGCTACTTCTTTGACCAGAGATCCTGATTTCACAGCGGCACTTGCTTCTGCTATCTCAGAAAGATTTCTAGATGATACTTCTATGCCAAAACGTTGA 912 0.4594 MSLTSQPNLSSMEPTCVDTSLNLNVIPSSHIDLAGEVLVEELRRLSSENKRLTETLNHLCENYVALQKHLSEFNRLKNANFEKEEIPSLKRKVESENCANLFGVNAYAECGNEEETFKKPKQSTSPKVYKVCVRTDASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPGCPVKKKVQRSVEDRSVLVATYEGEHNHGEHETEISGNWRKSESPCGAGSVGGGGGGGSCSSMKGSGGPIIPLELVQSRVVDINAQKSWIQQFLVQQMATSLTRDPDFTAALASAISERFLDDTSMPKR* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01944 303 MobiDBLite consensus disorder prediction 199 237 - -
Lapu9g01944 303 Gene3D WRKY domain 128 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01944 303 Pfam WRKY DNA -binding domain 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01944 303 SMART WRKY_cls 144 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01944 303 SUPERFAMILY WRKY DNA-binding domain 141 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01944 303 ProSiteProfiles WRKY domain profile. 146 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01944 303 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 36 294 IPR044810 GO:0003700
Lapu9g01944 303 Coils Coil 35 62 - -
Lapu9g01944 303 FunFam WRKY transcription factor 40 129 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01944 Lapu-Chr9 34329647 34331123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01944 15 294 WRKY Transcription Factor Family AT1G80840 44.178 1.30e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g01944 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01944 - - gmx:100127373 399.438