Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01943 ATGGAAGAGTGTCACACGGTGTTCGGAAAGTACGAGATGGGGAGGCTTCTTGGGAAGGGGACGTTTGCGAAAGTGTATTACGGGAAGCAAATAAGCACGGGCGAGAGCGTGGCGATCAAAGTAATGAGCAAAGAGCAGGTGCGGAAGGAAGGAATGATGGAACAGATCAAACGCGAAATCTCGGTCATGCGTTTGGTGCGACATCCAAACGTGGTGGAACTGAAGGAAGTGATGGCCACAAAGACAAAAATCTTCTTCGTCATGGAATACGTGCGTGGCGGCGAACTCTTCGCCAAAATCTCCAAAGGCAAACTCAAAGAAGATCTCGCCCGCAAATACTTCCAGCAATTAATCAGCGCCGTCGATTATTGCCACAGCAGAGGGGTGTCCCACCGCGATCTCAAACCCGAGAATCTACTCCTCGACGACGACGAAAACCTTAAAATCTCTGACTTCGGTTTATCCGCGCTGCCGGAGCAGCTTCGTTACGATGGACTCCTCCATACGCAGTGCGGGACCCCTGCCTACGTGGCACCGGAAGTCTTGAGAAAAAAAGGGTACGACGGCTCAAAAGCCGATATCTGGTCATGCGGCGTCGTTTTGTACGTTCTCCTCGCCGGCTTTCTCCCCTTCCAACACGAGAATCTCATGACCATGTATAACAAAGTCCTCAGAGCCGAATTCGATTTCCCACCCTGGTTTTCTCCCGAATCCAAGAGGTTGATCTCCAAGATTCTCGTCGCCGACCCTGCCAAGAGAACCACCATTTCTGCCATCACGCGCGTCCCCTGGTTCCGCAAAGGCCTTCCCTCGTTTTCCGTCGCCGACACGTGTCAGCTCGACAAACAAGAGCCCGTTACGGAGGAAGCTAACAATTCCAAGGTTCCCAAGTTCTTCAACGCCTTCGAGTTCATCTCCTCCATGTCCTCGGGCTTTGATCTCTCGGGCCTGTTCGAGACCAAGCGGAAGAAGGCCGCGGTGTTCACCTCCAAGTGTTCGGCGGTGGCGATTGTGGCCAAGATCGCCGCGGCGGCCAGGGCGCTCAGTTTCACGGTGGCGGAGGTGAAGAACTTCAAGATTCGGCTCCAGGGCACGGCCGTGGGCAGGAAGGGGCGGCTGGCCATCACGGCGGAGGTGTTCGAGGTGGCACCGGAGGTAGCCGTCGTGGAGTTTTCAAAGTCCGCCGGCGATACTTTGGAATACGCGAAGTTTTGCGACGAGGACGTTAGGCCCGCGTTGAAGGACATTGTTTGGACGTGGCAAGGGGATGCCACGTGTGCAATTAACATCCCCGGCCGTCACGGCGAGGAGTGTCAAAAGCAGATAGAAACTGTGACAGGTTCTAACCAATTTTCTTCTGCCTTTCGTCTTTATTCCCTGCCTAATTTTTAG 1392 0.5417 MEECHTVFGKYEMGRLLGKGTFAKVYYGKQISTGESVAIKVMSKEQVRKEGMMEQIKREISVMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFAKISKGKLKEDLARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDDDENLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVVLYVLLAGFLPFQHENLMTMYNKVLRAEFDFPPWFSPESKRLISKILVADPAKRTTISAITRVPWFRKGLPSFSVADTCQLDKQEPVTEEANNSKVPKFFNAFEFISSMSSGFDLSGLFETKRKKAAVFTSKCSAVAIVAKIAAAARALSFTVAEVKNFKIRLQGTAVGRKGRLAITAEVFEVAPEVAVVEFSKSAGDTLEYAKFCDEDVRPALKDIVWTWQGDATCAINIPGRHGEECQKQIETVTGSNQFSSAFRLYSLPNF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01943 463 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01943 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Lapu9g01943 463 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Lapu9g01943 463 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 414 - -
Lapu9g01943 463 FunFam Non-specific serine/threonine protein kinase 4 299 - -
Lapu9g01943 463 Gene3D Transferase(Phosphotransferase) domain 1 91 269 - -
Lapu9g01943 463 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Lapu9g01943 463 Gene3D Kinase associated domain 1, KA1 294 419 - -
Lapu9g01943 463 CDD STKc_SnRK3 10 264 - -
Lapu9g01943 463 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Lapu9g01943 463 CDD CIPK_C 300 414 - -
Lapu9g01943 463 ProSiteProfiles NAF domain profile. 294 319 IPR018451 GO:0007165
Lapu9g01943 463 Pfam NAF domain 296 353 IPR004041 GO:0007165
Lapu9g01943 463 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01943 463 SUPERFAMILY Protein kinase-like (PK-like) 7 282 IPR011009 -
Lapu9g01943 463 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01943 463 FunFam Non-specific serine/threonine protein kinase 294 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01943 Lapu-Chr9 34318011 34319839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01943 2 423 CBL-interacting serine-threonine protein kinases AT5G25110 68.519 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lapu9g01943 Pkinase 4.9e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01943 - - gmx:100817520 792.727