Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01926 ATGGCCAGATCACAACAGCGATACCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGACACCCCATATTGAAAACTAGAATATGGCTAGGAACTTTTGAAACTGCTGAGGATGCAGCTAGAGCCTATGATGAAGCAGCAAGGCTAATGTGTGGCACAAGGGCAAGAACGAACTTCCCTTACAACCCCAATACATCTCAGTCATCATCTTCGAAGCTTCTCTCAGCAACTTTAACTGCAAAACTACATAGGTGTTACATGGCTTCTTTGCAAATGACAAGGCCATCACTACCAGAGCCTCAGAGAGTGGCTTCACCAAATGGCATCACCTCTACAAGTAACTTCTCCATAAAGAGTAACGAAACTAAAACAATGTTGCCACAAAAGAGACAAAAGGAGGAGCAAGAAGTAGAGGAGAATTGGGTTTTGAAGAAGGTTAAGGTGGAAAGGGCTCAACAGTTCAAGCCTCTTGAAGAGGACCACATTGAGCAAATGATAGAGGAGTTGCTGCATTATGGCACTATTGAGCTATGCTCTGTGATTCCCCACCAGAGGCTCTTTTAA 576 0.4497 MARSQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNFPYNPNTSQSSSSKLLSATLTAKLHRCYMASLQMTRPSLPEPQRVASPNGITSTSNFSIKSNETKTMLPQKRQKEEQEVEENWVLKKVKVERAQQFKPLEEDHIEQMIEELLHYGTIELCSVIPHQRLF* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01926 191 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Lapu9g01926 191 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Lapu9g01926 191 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Lapu9g01926 191 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 137 - -
Lapu9g01926 191 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Lapu9g01926 191 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Lapu9g01926 191 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Lapu9g01926 191 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Lapu9g01926 191 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Lapu9g01926 191 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01926 Lapu-Chr9 34094437 34095222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01926 1 190 AP2-EREBP Transcription Factor Family AT5G25190 65.263 3.20e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu9g01926 AP2 6.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01926 - - gmx:100804510 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01926 9 34094437 34095222 Lapu9g01926 9 34094437 34095222 ECH