Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01921 ATGTCTAACTCTGTCATCAATGGCAATGATTCTCTCACTGGTCACATCATATCTACAACTATTGGAGGCAAAAATGGGGAACCTAAACAGACTATTAGTTACATGGCAGAACGGGTTGTAGGAACTGGATCATTTGGAATTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAAGCAGTGGCAATTAAAAAGGTTTTACAAGACAGGCGATACAAGAATCGTGAACTACAGTTAATGCGTGTGATGGATCACCCAAATGTGATCACTCTGAAGCATTGTTTCTTTTCCACTACAAGTACAGATGAACTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCCATGTACAGAGTCCTAAAACACTATAGCAATGCTAATCAAAGAATGCCCATCATCTATGTGAAACTTTACATGTACCAGATTTTCAGGGGGTTGGCTTATATCCACACTGTTCCCAAAGTTTGCCACAGAGATTTGAAGCCTCAAAATATACTGGTGGATCCTCTCACACACCAAGTGAAGCTATGTGATTTTGGAAGCGCGAAAGTTCTAGTCCAAGGTGAAGCTAATATATCATACATATGTTCACGATTCTATCGAGCACCAGAACTTATATTTGGTGCCACTGAGTATACAAGCTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAGGTCAGTGTTATTGATTTGTTTTCTTTATTAACTCATATTACTAAATACTATTATCCATTATTCCCTGGCGAAAATGCTGTAGACCAGCTCGTACATATTATAAAGGTGCTTGGCACACCTACTCGAGAGGAAGTACGCTGTATGAATCCCAATTACAATGACTTTAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCAGAAGCTATCGATCTTGCATCCAGGCTCCTGCAATACTCCCCAAGTCTTAGGTGCACTGCGCTTGAAGCATGTGCTCATCCTTTCTTTGATGAACTCCGAGAACCGAATGCTCGCCTGCCAAATGGTCGTCCATTCCCCCCTCTATTTAACTTCAAACAGGAATTAACCGGAGCATCTCCTGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAGCGGCAAATAGGGCTACAATTTATTCATCTGGGAGGATCGTGA 1179 0.4139 MSNSVINGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVMDHPNVITLKHCFFSTTSTDELFLNLVMEYVPESMYRVLKHYSNANQRMPIIYVKLYMYQIFRGLAYIHTVPKVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVQGEANISYICSRFYRAPELIFGATEYTSSIDIWSAGCVLAELLLGQVSVIDLFSLLTHITKYYYPLFPGENAVDQLVHIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELTGASPELVNKLIPDHVKRQIGLQFIHLGGS* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01921 392 SMART serkin_6 34 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01921 392 Pfam Protein kinase domain 34 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01921 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Lapu9g01921 392 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
Lapu9g01921 392 CDD STKc_GSK3 29 339 IPR039192 -
Lapu9g01921 392 FunFam Glycogen synthase kinase-3 beta 18 113 - -
Lapu9g01921 392 Gene3D Phosphorylase Kinase; domain 1 19 113 - -
Lapu9g01921 392 SUPERFAMILY Protein kinase-like (PK-like) 33 360 IPR011009 -
Lapu9g01921 392 ProSiteProfiles Protein kinase domain profile. 34 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01921 392 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 3 381 - -
Lapu9g01921 392 Gene3D Transferase(Phosphotransferase) domain 1 114 379 - -
Lapu9g01921 392 FunFam Shaggy-related protein kinase kappa 114 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01921 Lapu-Chr9 34029800 34035465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01921 38 374 MAP Kinase Gene Family AT3G59790 33.523 6.80e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lapu9g01921 Pkinase 8.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01921 K14502 - gmx:100779909 746.888